Gene : CXE12 A. thaliana TAIR10
Primary Identifier:  ? AT3G48690 Defline:  (1 of 3) PTHR23024:SF157 - CARBOXYLESTERASE 12-RELATED
Genomic Order:  3864 Name:  ? AT3G48690
Secondary Identifier:  ? PAC:19662995
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6303 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48690 0.5kb upstream 0.5kb upstream 1688 true Chr3: 18037047-18038734 Arabidopsis thaliana
AT3G48690 0.5kb upstream 0.5kb upstream 500 false Chr3: 18038235-18038734 Arabidopsis thaliana
AT3G48690 0.5kb downstream 0.5kb downstream 1688 true Chr3: 18036547-18038234 Arabidopsis thaliana
AT3G48690 0.5kb downstream 0.5kb downstream 500 false Chr3: 18036547-18037046 Arabidopsis thaliana
AT3G48690 1.0kb upstream 1.0kb upstream 2188 true Chr3: 18037047-18039234 Arabidopsis thaliana
AT3G48690 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18038235-18039234 Arabidopsis thaliana
AT3G48690 1.0kb downstream 1.0kb downstream 2188 true Chr3: 18036047-18038234 Arabidopsis thaliana
AT3G48690 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18036047-18037046 Arabidopsis thaliana
AT3G48690 2.0kb upstream 2.0kb upstream 3188 true Chr3: 18037047-18040234 Arabidopsis thaliana
AT3G48690 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18038235-18040234 Arabidopsis thaliana
AT3G48690 2.0kb downstream 2.0kb downstream 3188 true Chr3: 18035047-18038234 Arabidopsis thaliana
AT3G48690 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18035047-18037046 Arabidopsis thaliana
AT3G48690 5.0kb upstream 5.0kb upstream 6188 true Chr3: 18037047-18043234 Arabidopsis thaliana
AT3G48690 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18038235-18043234 Arabidopsis thaliana
AT3G48690 5.0kb downstream 5.0kb downstream 6188 true Chr3: 18032047-18038234 Arabidopsis thaliana
AT3G48690 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18032047-18037046 Arabidopsis thaliana
AT3G48690 10.0kb upstream 10.0kb upstream 11188 true Chr3: 18037047-18048234 Arabidopsis thaliana
AT3G48690 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18038235-18048234 Arabidopsis thaliana
AT3G48690 10.0kb downstream 10.0kb downstream 11188 true Chr3: 18027047-18038234 Arabidopsis thaliana
AT3G48690 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18027047-18037046 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375372 5261 Brassicaceae View MSA
123837264 5264 Brassicales-Malvales View MSA
124322277 5266 SBM View MSA
124252668 5268 Malvidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.055     High  
cufflinks 11.756        
cufflinks 64.862     High  
cufflinks 10.789        
cufflinks 65.462     High  
cufflinks 5.629       Low

0 Strain