Gene : TSO2 A. thaliana TAIR10
Primary Identifier:  ? AT3G27060 Defline:  (1 of 2) 1.17.4.2 - Ribonucleoside-triphosphate reductase / Ribonucleotide reductase
Genomic Order:  2860 Name:  ? AT3G27060
Secondary Identifier:  ? PAC:19660956
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-6545 Arabidopsis thaliana pathologic  
Athaliana PWY-7184 Arabidopsis thaliana pathologic  
Athaliana PWY-7210 Arabidopsis thaliana pathologic  
Athaliana PWY-7211 Arabidopsis thaliana pathologic  
Athaliana PWY-7220 Arabidopsis thaliana pathologic  
Athaliana PWY-7222 Arabidopsis thaliana pathologic  
Athaliana PWY-7226 Arabidopsis thaliana pathologic  
Athaliana PWY-7227 Arabidopsis thaliana pathologic  
Athaliana PWY-7228 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27060 0.5kb upstream 0.5kb upstream 1930 true Chr3: 9979866-9981795 Arabidopsis thaliana
AT3G27060 0.5kb upstream 0.5kb upstream 500 false Chr3: 9981296-9981795 Arabidopsis thaliana
AT3G27060 0.5kb downstream 0.5kb downstream 1930 true Chr3: 9979366-9981295 Arabidopsis thaliana
AT3G27060 0.5kb downstream 0.5kb downstream 500 false Chr3: 9979366-9979865 Arabidopsis thaliana
AT3G27060 1.0kb upstream 1.0kb upstream 2430 true Chr3: 9979866-9982295 Arabidopsis thaliana
AT3G27060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9981296-9982295 Arabidopsis thaliana
AT3G27060 1.0kb downstream 1.0kb downstream 2430 true Chr3: 9978866-9981295 Arabidopsis thaliana
AT3G27060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9978866-9979865 Arabidopsis thaliana
AT3G27060 2.0kb upstream 2.0kb upstream 3430 true Chr3: 9979866-9983295 Arabidopsis thaliana
AT3G27060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9981296-9983295 Arabidopsis thaliana
AT3G27060 2.0kb downstream 2.0kb downstream 3430 true Chr3: 9977866-9981295 Arabidopsis thaliana
AT3G27060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9977866-9979865 Arabidopsis thaliana
AT3G27060 5.0kb upstream 5.0kb upstream 6430 true Chr3: 9979866-9986295 Arabidopsis thaliana
AT3G27060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9981296-9986295 Arabidopsis thaliana
AT3G27060 5.0kb downstream 5.0kb downstream 6430 true Chr3: 9974866-9981295 Arabidopsis thaliana
AT3G27060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9974866-9979865 Arabidopsis thaliana
AT3G27060 10.0kb upstream 10.0kb upstream 11430 true Chr3: 9979866-9991295 Arabidopsis thaliana
AT3G27060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9981296-9991295 Arabidopsis thaliana
AT3G27060 10.0kb downstream 10.0kb downstream 11430 true Chr3: 9969866-9981295 Arabidopsis thaliana
AT3G27060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9969866-9979865 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360169 5261 Brassicaceae View MSA
123832091 5264 Brassicales-Malvales View MSA
124342160 5266 SBM View MSA
124244448 5268 Malvidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.015     High  
cufflinks 30.111     High  
cufflinks 27.117     High  
cufflinks 24.652        
cufflinks 18.646       Low
cufflinks 40.918     High High

0 Strain