Gene : RNR2A A. thaliana TAIR10
Primary Identifier:  ? AT3G23580 Defline:  (1 of 1) PTHR23409//PTHR23409:SF24 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN // RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN A
Genomic Order:  2472 Name:  ? AT3G23580
Secondary Identifier:  ? PAC:19659134
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-6545 Arabidopsis thaliana pathologic  
Athaliana PWY-7184 Arabidopsis thaliana pathologic  
Athaliana PWY-7210 Arabidopsis thaliana pathologic  
Athaliana PWY-7211 Arabidopsis thaliana pathologic  
Athaliana PWY-7220 Arabidopsis thaliana pathologic  
Athaliana PWY-7222 Arabidopsis thaliana pathologic  
Athaliana PWY-7226 Arabidopsis thaliana pathologic  
Athaliana PWY-7227 Arabidopsis thaliana pathologic  
Athaliana PWY-7228 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23580 0.5kb upstream 0.5kb upstream 3271 true Chr3: 8459545-8462815 Arabidopsis thaliana
AT3G23580 0.5kb upstream 0.5kb upstream 500 false Chr3: 8459545-8460044 Arabidopsis thaliana
AT3G23580 0.5kb downstream 0.5kb downstream 3271 true Chr3: 8460045-8463315 Arabidopsis thaliana
AT3G23580 0.5kb downstream 0.5kb downstream 500 false Chr3: 8462816-8463315 Arabidopsis thaliana
AT3G23580 1.0kb upstream 1.0kb upstream 3771 true Chr3: 8459045-8462815 Arabidopsis thaliana
AT3G23580 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8459045-8460044 Arabidopsis thaliana
AT3G23580 1.0kb downstream 1.0kb downstream 3771 true Chr3: 8460045-8463815 Arabidopsis thaliana
AT3G23580 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8462816-8463815 Arabidopsis thaliana
AT3G23580 2.0kb upstream 2.0kb upstream 4771 true Chr3: 8458045-8462815 Arabidopsis thaliana
AT3G23580 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8458045-8460044 Arabidopsis thaliana
AT3G23580 2.0kb downstream 2.0kb downstream 4771 true Chr3: 8460045-8464815 Arabidopsis thaliana
AT3G23580 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8462816-8464815 Arabidopsis thaliana
AT3G23580 5.0kb upstream 5.0kb upstream 7771 true Chr3: 8455045-8462815 Arabidopsis thaliana
AT3G23580 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8455045-8460044 Arabidopsis thaliana
AT3G23580 5.0kb downstream 5.0kb downstream 7771 true Chr3: 8460045-8467815 Arabidopsis thaliana
AT3G23580 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8462816-8467815 Arabidopsis thaliana
AT3G23580 10.0kb upstream 10.0kb upstream 12771 true Chr3: 8450045-8462815 Arabidopsis thaliana
AT3G23580 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8450045-8460044 Arabidopsis thaliana
AT3G23580 10.0kb downstream 10.0kb downstream 12771 true Chr3: 8460045-8472815 Arabidopsis thaliana
AT3G23580 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8462816-8472815 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360867 5261 Brassicaceae View MSA
123828052 5264 Brassicales-Malvales View MSA
124344380 5266 SBM View MSA
124244191 5268 Malvidae View MSA
124062511 5270 Rosid View MSA
123738925 5271 Pentapetalae View MSA
122769936 5272 Eudicot View MSA
122044318 5273 Angiosperm View MSA
121310276 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.815       High
cufflinks 9.105        
cufflinks 10.85        
cufflinks 9.71        
cufflinks 10.558        
cufflinks 9.212        

0 Strain