Gene : EDF3 A. thaliana TAIR10
Primary Identifier:  ? AT3G25730 Defline:  (1 of 6) K09287 - RAV-like factor (RAV)
Genomic Order:  2705 Name:  ? AT3G25730
Secondary Identifier:  ? PAC:19658677
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25730 0.5kb upstream 0.5kb upstream 1828 true Chr3: 9395920-9397747 Arabidopsis thaliana
AT3G25730 0.5kb upstream 0.5kb upstream 500 false Chr3: 9395920-9396419 Arabidopsis thaliana
AT3G25730 0.5kb downstream 0.5kb downstream 1828 true Chr3: 9396420-9398247 Arabidopsis thaliana
AT3G25730 0.5kb downstream 0.5kb downstream 500 false Chr3: 9397748-9398247 Arabidopsis thaliana
AT3G25730 1.0kb upstream 1.0kb upstream 2328 true Chr3: 9395420-9397747 Arabidopsis thaliana
AT3G25730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9395420-9396419 Arabidopsis thaliana
AT3G25730 1.0kb downstream 1.0kb downstream 2328 true Chr3: 9396420-9398747 Arabidopsis thaliana
AT3G25730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9397748-9398747 Arabidopsis thaliana
AT3G25730 2.0kb upstream 2.0kb upstream 3328 true Chr3: 9394420-9397747 Arabidopsis thaliana
AT3G25730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9394420-9396419 Arabidopsis thaliana
AT3G25730 2.0kb downstream 2.0kb downstream 3328 true Chr3: 9396420-9399747 Arabidopsis thaliana
AT3G25730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9397748-9399747 Arabidopsis thaliana
AT3G25730 5.0kb upstream 5.0kb upstream 6328 true Chr3: 9391420-9397747 Arabidopsis thaliana
AT3G25730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9391420-9396419 Arabidopsis thaliana
AT3G25730 5.0kb downstream 5.0kb downstream 6328 true Chr3: 9396420-9402747 Arabidopsis thaliana
AT3G25730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9397748-9402747 Arabidopsis thaliana
AT3G25730 10.0kb upstream 10.0kb upstream 11328 true Chr3: 9386420-9397747 Arabidopsis thaliana
AT3G25730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9386420-9396419 Arabidopsis thaliana
AT3G25730 10.0kb downstream 10.0kb downstream 11328 true Chr3: 9396420-9407747 Arabidopsis thaliana
AT3G25730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9397748-9407747 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367276 5261 Brassicaceae View MSA
123799322 5264 Brassicales-Malvales View MSA
124296855 5266 SBM View MSA
124148893 5268 Malvidae View MSA
123874805 5270 Rosid View MSA
123458727 5271 Pentapetalae View MSA
122494126 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.718       Low
cufflinks 21.282        
cufflinks 1.08        
cufflinks 34.023     High High
cufflinks 0.869        
cufflinks 12.141        

0 Strain