Gene : AT3G26630 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2808
Name:  ? AT3G26630 Secondary Identifier:  ? PAC:19662751
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26630 0.5kb upstream 0.5kb upstream 2115 true Chr3: 9791371-9793485 Arabidopsis thaliana
AT3G26630 0.5kb upstream 0.5kb upstream 500 false Chr3: 9792986-9793485 Arabidopsis thaliana
AT3G26630 0.5kb downstream 0.5kb downstream 2115 true Chr3: 9790871-9792985 Arabidopsis thaliana
AT3G26630 0.5kb downstream 0.5kb downstream 500 false Chr3: 9790871-9791370 Arabidopsis thaliana
AT3G26630 1.0kb upstream 1.0kb upstream 2615 true Chr3: 9791371-9793985 Arabidopsis thaliana
AT3G26630 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9792986-9793985 Arabidopsis thaliana
AT3G26630 1.0kb downstream 1.0kb downstream 2615 true Chr3: 9790371-9792985 Arabidopsis thaliana
AT3G26630 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9790371-9791370 Arabidopsis thaliana
AT3G26630 2.0kb upstream 2.0kb upstream 3615 true Chr3: 9791371-9794985 Arabidopsis thaliana
AT3G26630 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9792986-9794985 Arabidopsis thaliana
AT3G26630 2.0kb downstream 2.0kb downstream 3615 true Chr3: 9789371-9792985 Arabidopsis thaliana
AT3G26630 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9789371-9791370 Arabidopsis thaliana
AT3G26630 5.0kb upstream 5.0kb upstream 6615 true Chr3: 9791371-9797985 Arabidopsis thaliana
AT3G26630 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9792986-9797985 Arabidopsis thaliana
AT3G26630 5.0kb downstream 5.0kb downstream 6615 true Chr3: 9786371-9792985 Arabidopsis thaliana
AT3G26630 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9786371-9791370 Arabidopsis thaliana
AT3G26630 10.0kb upstream 10.0kb upstream 11615 true Chr3: 9791371-9802985 Arabidopsis thaliana
AT3G26630 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9792986-9802985 Arabidopsis thaliana
AT3G26630 10.0kb downstream 10.0kb downstream 11615 true Chr3: 9781371-9792985 Arabidopsis thaliana
AT3G26630 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9781371-9791370 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365188 5261 Brassicaceae View MSA
123798911 5264 Brassicales-Malvales View MSA
124346450 5266 SBM View MSA
124243436 5268 Malvidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.698       High
cufflinks 6.891        
cufflinks 16.314        
cufflinks 6.915        
cufflinks 14.896        
cufflinks 6.054       Low

0 Strain