Gene : AT3G15750 A. thaliana TAIR10
Defline:  (1 of 2) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1614
Name:  ? AT3G15750 Secondary Identifier:  ? PAC:19659047
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15750 0.5kb upstream 0.5kb upstream 1899 true Chr3: 5334578-5336476 Arabidopsis thaliana
AT3G15750 0.5kb upstream 0.5kb upstream 500 false Chr3: 5334578-5335077 Arabidopsis thaliana
AT3G15750 0.5kb downstream 0.5kb downstream 1899 true Chr3: 5335078-5336976 Arabidopsis thaliana
AT3G15750 0.5kb downstream 0.5kb downstream 500 false Chr3: 5336477-5336976 Arabidopsis thaliana
AT3G15750 1.0kb upstream 1.0kb upstream 2399 true Chr3: 5334078-5336476 Arabidopsis thaliana
AT3G15750 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5334078-5335077 Arabidopsis thaliana
AT3G15750 1.0kb downstream 1.0kb downstream 2399 true Chr3: 5335078-5337476 Arabidopsis thaliana
AT3G15750 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5336477-5337476 Arabidopsis thaliana
AT3G15750 2.0kb upstream 2.0kb upstream 3399 true Chr3: 5333078-5336476 Arabidopsis thaliana
AT3G15750 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5333078-5335077 Arabidopsis thaliana
AT3G15750 2.0kb downstream 2.0kb downstream 3399 true Chr3: 5335078-5338476 Arabidopsis thaliana
AT3G15750 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5336477-5338476 Arabidopsis thaliana
AT3G15750 5.0kb upstream 5.0kb upstream 6399 true Chr3: 5330078-5336476 Arabidopsis thaliana
AT3G15750 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5330078-5335077 Arabidopsis thaliana
AT3G15750 5.0kb downstream 5.0kb downstream 6399 true Chr3: 5335078-5341476 Arabidopsis thaliana
AT3G15750 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5336477-5341476 Arabidopsis thaliana
AT3G15750 10.0kb upstream 10.0kb upstream 11399 true Chr3: 5325078-5336476 Arabidopsis thaliana
AT3G15750 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5325078-5335077 Arabidopsis thaliana
AT3G15750 10.0kb downstream 10.0kb downstream 11399 true Chr3: 5335078-5346476 Arabidopsis thaliana
AT3G15750 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5336477-5346476 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329717 5261 Brassicaceae Singleton cluster - no MSA
123771006 5264 Brassicales-Malvales Singleton cluster - no MSA
124269540 5266 SBM Singleton cluster - no MSA
124125673 5268 Malvidae Singleton cluster - no MSA
124050165 5270 Rosid View MSA
123752339 5271 Pentapetalae View MSA
122789611 5272 Eudicot View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.291        
cufflinks 4.599       High
cufflinks 2.305        
cufflinks 4.286       High
cufflinks 2.533        
cufflinks 3.452        

0 Strain