Gene : AT3G10440 A. thaliana TAIR10
Defline:  (1 of 2) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Genomic Order:  1005
Name:  ? AT3G10440 Secondary Identifier:  ? PAC:19662568
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G10440 0.5kb upstream 0.5kb upstream 4159 true Chr3: 3244829-3248987 Arabidopsis thaliana
AT3G10440 0.5kb upstream 0.5kb upstream 500 false Chr3: 3244829-3245328 Arabidopsis thaliana
AT3G10440 0.5kb downstream 0.5kb downstream 4159 true Chr3: 3245329-3249487 Arabidopsis thaliana
AT3G10440 0.5kb downstream 0.5kb downstream 500 false Chr3: 3248988-3249487 Arabidopsis thaliana
AT3G10440 1.0kb upstream 1.0kb upstream 4659 true Chr3: 3244329-3248987 Arabidopsis thaliana
AT3G10440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3244329-3245328 Arabidopsis thaliana
AT3G10440 1.0kb downstream 1.0kb downstream 4659 true Chr3: 3245329-3249987 Arabidopsis thaliana
AT3G10440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3248988-3249987 Arabidopsis thaliana
AT3G10440 2.0kb upstream 2.0kb upstream 5659 true Chr3: 3243329-3248987 Arabidopsis thaliana
AT3G10440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3243329-3245328 Arabidopsis thaliana
AT3G10440 2.0kb downstream 2.0kb downstream 5659 true Chr3: 3245329-3250987 Arabidopsis thaliana
AT3G10440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3248988-3250987 Arabidopsis thaliana
AT3G10440 5.0kb upstream 5.0kb upstream 8659 true Chr3: 3240329-3248987 Arabidopsis thaliana
AT3G10440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3240329-3245328 Arabidopsis thaliana
AT3G10440 5.0kb downstream 5.0kb downstream 8659 true Chr3: 3245329-3253987 Arabidopsis thaliana
AT3G10440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3248988-3253987 Arabidopsis thaliana
AT3G10440 10.0kb upstream 10.0kb upstream 13659 true Chr3: 3235329-3248987 Arabidopsis thaliana
AT3G10440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3235329-3245328 Arabidopsis thaliana
AT3G10440 10.0kb downstream 10.0kb downstream 13659 true Chr3: 3245329-3258987 Arabidopsis thaliana
AT3G10440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3248988-3258987 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122380773 5261 Brassicaceae View MSA
123838720 5264 Brassicales-Malvales View MSA
124322493 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.583        
cufflinks 4.26       High
cufflinks 2.302        
cufflinks 3.608        
cufflinks 2.243       Low
cufflinks 3.866        

0 Strain