Gene : AT3G09735 A. thaliana TAIR10
Defline:  (1 of 3) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  926
Name:  ? AT3G09735 Secondary Identifier:  ? PAC:19663590
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09735 0.5kb upstream 0.5kb upstream 1844 true Chr3: 2986626-2988469 Arabidopsis thaliana
AT3G09735 0.5kb upstream 0.5kb upstream 500 false Chr3: 2987970-2988469 Arabidopsis thaliana
AT3G09735 0.5kb downstream 0.5kb downstream 1844 true Chr3: 2986126-2987969 Arabidopsis thaliana
AT3G09735 0.5kb downstream 0.5kb downstream 500 false Chr3: 2986126-2986625 Arabidopsis thaliana
AT3G09735 1.0kb upstream 1.0kb upstream 2344 true Chr3: 2986626-2988969 Arabidopsis thaliana
AT3G09735 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2987970-2988969 Arabidopsis thaliana
AT3G09735 1.0kb downstream 1.0kb downstream 2344 true Chr3: 2985626-2987969 Arabidopsis thaliana
AT3G09735 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2985626-2986625 Arabidopsis thaliana
AT3G09735 2.0kb upstream 2.0kb upstream 3344 true Chr3: 2986626-2989969 Arabidopsis thaliana
AT3G09735 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2987970-2989969 Arabidopsis thaliana
AT3G09735 2.0kb downstream 2.0kb downstream 3344 true Chr3: 2984626-2987969 Arabidopsis thaliana
AT3G09735 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2984626-2986625 Arabidopsis thaliana
AT3G09735 5.0kb upstream 5.0kb upstream 6344 true Chr3: 2986626-2992969 Arabidopsis thaliana
AT3G09735 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2987970-2992969 Arabidopsis thaliana
AT3G09735 5.0kb downstream 5.0kb downstream 6344 true Chr3: 2981626-2987969 Arabidopsis thaliana
AT3G09735 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2981626-2986625 Arabidopsis thaliana
AT3G09735 10.0kb upstream 10.0kb upstream 11344 true Chr3: 2986626-2997969 Arabidopsis thaliana
AT3G09735 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2987970-2997969 Arabidopsis thaliana
AT3G09735 10.0kb downstream 10.0kb downstream 11344 true Chr3: 2976626-2987969 Arabidopsis thaliana
AT3G09735 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2976626-2986625 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373786 5261 Brassicaceae View MSA
123835903 5264 Brassicales-Malvales View MSA
124349743 5266 SBM View MSA
124251258 5268 Malvidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.978        
cufflinks 32.98     High  
cufflinks 17.506       Low
cufflinks 32.141     High  
cufflinks 20.74        
cufflinks 30.181     High  

0 Strain