Gene : IDH-VI A. thaliana TAIR10
Primary Identifier:  ? AT3G09810 Defline:  (1 of 6) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase
Genomic Order:  934 Name:  ? AT3G09810
Secondary Identifier:  ? PAC:19660442
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5690 Arabidopsis thaliana pathologic  
Athaliana PWY-6549 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09810 0.5kb upstream 0.5kb upstream 3244 true Chr3: 3008194-3011437 Arabidopsis thaliana
AT3G09810 0.5kb upstream 0.5kb upstream 500 false Chr3: 3008194-3008693 Arabidopsis thaliana
AT3G09810 0.5kb downstream 0.5kb downstream 3244 true Chr3: 3008694-3011937 Arabidopsis thaliana
AT3G09810 0.5kb downstream 0.5kb downstream 500 false Chr3: 3011438-3011937 Arabidopsis thaliana
AT3G09810 1.0kb upstream 1.0kb upstream 3744 true Chr3: 3007694-3011437 Arabidopsis thaliana
AT3G09810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3007694-3008693 Arabidopsis thaliana
AT3G09810 1.0kb downstream 1.0kb downstream 3744 true Chr3: 3008694-3012437 Arabidopsis thaliana
AT3G09810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3011438-3012437 Arabidopsis thaliana
AT3G09810 2.0kb upstream 2.0kb upstream 4744 true Chr3: 3006694-3011437 Arabidopsis thaliana
AT3G09810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3006694-3008693 Arabidopsis thaliana
AT3G09810 2.0kb downstream 2.0kb downstream 4744 true Chr3: 3008694-3013437 Arabidopsis thaliana
AT3G09810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3011438-3013437 Arabidopsis thaliana
AT3G09810 5.0kb upstream 5.0kb upstream 7744 true Chr3: 3003694-3011437 Arabidopsis thaliana
AT3G09810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3003694-3008693 Arabidopsis thaliana
AT3G09810 5.0kb downstream 5.0kb downstream 7744 true Chr3: 3008694-3016437 Arabidopsis thaliana
AT3G09810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3011438-3016437 Arabidopsis thaliana
AT3G09810 10.0kb upstream 10.0kb upstream 12744 true Chr3: 2998694-3011437 Arabidopsis thaliana
AT3G09810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2998694-3008693 Arabidopsis thaliana
AT3G09810 10.0kb downstream 10.0kb downstream 12744 true Chr3: 3008694-3021437 Arabidopsis thaliana
AT3G09810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3011438-3021437 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510628 5273 Angiosperm View MSA
122366336 5261 Brassicaceae View MSA
123799151 5264 Brassicales-Malvales View MSA
124296699 5266 SBM View MSA
124148776 5268 Malvidae View MSA
123874707 5270 Rosid View MSA
123458637 5271 Pentapetalae View MSA
122494038 5272 Eudicot View MSA
120783717 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.996        
cufflinks 13.906        
cufflinks 8.342       Low
cufflinks 14.956        
cufflinks 8.282       Low
cufflinks 17.816        

0 Strain