Gene : RABE1e A. thaliana TAIR10
Primary Identifier:  ? AT3G09900 Defline:  (1 of 5) K07901 - Ras-related protein Rab-8A (RAB8A, MEL)
Genomic Order:  944 Name:  ? AT3G09900
Secondary Identifier:  ? PAC:19665173
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09900 0.5kb upstream 0.5kb upstream 2537 true Chr3: 3034057-3036593 Arabidopsis thaliana
AT3G09900 0.5kb upstream 0.5kb upstream 500 false Chr3: 3034057-3034556 Arabidopsis thaliana
AT3G09900 0.5kb downstream 0.5kb downstream 2537 true Chr3: 3034557-3037093 Arabidopsis thaliana
AT3G09900 0.5kb downstream 0.5kb downstream 500 false Chr3: 3036594-3037093 Arabidopsis thaliana
AT3G09900 1.0kb upstream 1.0kb upstream 3037 true Chr3: 3033557-3036593 Arabidopsis thaliana
AT3G09900 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3033557-3034556 Arabidopsis thaliana
AT3G09900 1.0kb downstream 1.0kb downstream 3037 true Chr3: 3034557-3037593 Arabidopsis thaliana
AT3G09900 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3036594-3037593 Arabidopsis thaliana
AT3G09900 2.0kb upstream 2.0kb upstream 4037 true Chr3: 3032557-3036593 Arabidopsis thaliana
AT3G09900 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3032557-3034556 Arabidopsis thaliana
AT3G09900 2.0kb downstream 2.0kb downstream 4037 true Chr3: 3034557-3038593 Arabidopsis thaliana
AT3G09900 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3036594-3038593 Arabidopsis thaliana
AT3G09900 5.0kb upstream 5.0kb upstream 7037 true Chr3: 3029557-3036593 Arabidopsis thaliana
AT3G09900 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3029557-3034556 Arabidopsis thaliana
AT3G09900 5.0kb downstream 5.0kb downstream 7037 true Chr3: 3034557-3041593 Arabidopsis thaliana
AT3G09900 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3036594-3041593 Arabidopsis thaliana
AT3G09900 10.0kb upstream 10.0kb upstream 12037 true Chr3: 3024557-3036593 Arabidopsis thaliana
AT3G09900 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3024557-3034556 Arabidopsis thaliana
AT3G09900 10.0kb downstream 10.0kb downstream 12037 true Chr3: 3034557-3046593 Arabidopsis thaliana
AT3G09900 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3036594-3046593 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691009 5273 Angiosperm View MSA
122380454 5261 Brassicaceae View MSA
123802724 5264 Brassicales-Malvales View MSA
124299894 5266 SBM View MSA
124151198 5268 Malvidae View MSA
123876683 5270 Rosid View MSA
123646682 5271 Pentapetalae View MSA
122680746 5272 Eudicot View MSA
123429129 5275 Viridiplantae View MSA
120962881 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.926       Low
cufflinks 32.241     High High
cufflinks 13.064        
cufflinks 28.821        
cufflinks 13.814        
cufflinks 23.235        

0 Strain