Gene : AT3G09405 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21562//PTHR21562:SF6 - NOTUM-RELATED // PECTINACETYLESTERASE FAMILY PROTEIN Genomic Order:  895
Name:  ? AT3G09405 Secondary Identifier:  ? PAC:19659104
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09405 0.5kb upstream 0.5kb upstream 3363 true Chr3: 2894812-2898174 Arabidopsis thaliana
AT3G09405 0.5kb upstream 0.5kb upstream 500 false Chr3: 2897675-2898174 Arabidopsis thaliana
AT3G09405 0.5kb downstream 0.5kb downstream 3363 true Chr3: 2894312-2897674 Arabidopsis thaliana
AT3G09405 0.5kb downstream 0.5kb downstream 500 false Chr3: 2894312-2894811 Arabidopsis thaliana
AT3G09405 1.0kb upstream 1.0kb upstream 3863 true Chr3: 2894812-2898674 Arabidopsis thaliana
AT3G09405 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2897675-2898674 Arabidopsis thaliana
AT3G09405 1.0kb downstream 1.0kb downstream 3863 true Chr3: 2893812-2897674 Arabidopsis thaliana
AT3G09405 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2893812-2894811 Arabidopsis thaliana
AT3G09405 2.0kb upstream 2.0kb upstream 4863 true Chr3: 2894812-2899674 Arabidopsis thaliana
AT3G09405 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2897675-2899674 Arabidopsis thaliana
AT3G09405 2.0kb downstream 2.0kb downstream 4863 true Chr3: 2892812-2897674 Arabidopsis thaliana
AT3G09405 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2892812-2894811 Arabidopsis thaliana
AT3G09405 5.0kb upstream 5.0kb upstream 7863 true Chr3: 2894812-2902674 Arabidopsis thaliana
AT3G09405 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2897675-2902674 Arabidopsis thaliana
AT3G09405 5.0kb downstream 5.0kb downstream 7863 true Chr3: 2889812-2897674 Arabidopsis thaliana
AT3G09405 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2889812-2894811 Arabidopsis thaliana
AT3G09405 10.0kb upstream 10.0kb upstream 12863 true Chr3: 2894812-2907674 Arabidopsis thaliana
AT3G09405 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2897675-2907674 Arabidopsis thaliana
AT3G09405 10.0kb downstream 10.0kb downstream 12863 true Chr3: 2884812-2897674 Arabidopsis thaliana
AT3G09405 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2884812-2894811 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381903 5261 Brassicaceae View MSA
123803527 5264 Brassicales-Malvales View MSA
124300629 5266 SBM View MSA
124151771 5268 Malvidae View MSA
124061185 5270 Rosid View MSA
123736666 5271 Pentapetalae View MSA
122769871 5272 Eudicot View MSA
122042324 5273 Angiosperm View MSA
121351620 5274 Embryophyte View MSA
123428380 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.222       High
cufflinks 2.285        
cufflinks 1.469       Low
cufflinks 2.102        
cufflinks 2.472        
cufflinks 1.671        

0 Strain