Gene : AT3G09020 A. thaliana TAIR10
Defline:  (1 of 3) K01988 - lactosylceramide 4-alpha-galactosyltransferase (A4GALT) Genomic Order:  853
Name:  ? AT3G09020 Secondary Identifier:  ? PAC:19659518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09020 0.5kb upstream 0.5kb upstream 1815 true Chr3: 2752807-2754621 Arabidopsis thaliana
AT3G09020 0.5kb upstream 0.5kb upstream 500 false Chr3: 2752807-2753306 Arabidopsis thaliana
AT3G09020 0.5kb downstream 0.5kb downstream 1815 true Chr3: 2753307-2755121 Arabidopsis thaliana
AT3G09020 0.5kb downstream 0.5kb downstream 500 false Chr3: 2754622-2755121 Arabidopsis thaliana
AT3G09020 1.0kb upstream 1.0kb upstream 2315 true Chr3: 2752307-2754621 Arabidopsis thaliana
AT3G09020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2752307-2753306 Arabidopsis thaliana
AT3G09020 1.0kb downstream 1.0kb downstream 2315 true Chr3: 2753307-2755621 Arabidopsis thaliana
AT3G09020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2754622-2755621 Arabidopsis thaliana
AT3G09020 2.0kb upstream 2.0kb upstream 3315 true Chr3: 2751307-2754621 Arabidopsis thaliana
AT3G09020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2751307-2753306 Arabidopsis thaliana
AT3G09020 2.0kb downstream 2.0kb downstream 3315 true Chr3: 2753307-2756621 Arabidopsis thaliana
AT3G09020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2754622-2756621 Arabidopsis thaliana
AT3G09020 5.0kb upstream 5.0kb upstream 6315 true Chr3: 2748307-2754621 Arabidopsis thaliana
AT3G09020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2748307-2753306 Arabidopsis thaliana
AT3G09020 5.0kb downstream 5.0kb downstream 6315 true Chr3: 2753307-2759621 Arabidopsis thaliana
AT3G09020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2754622-2759621 Arabidopsis thaliana
AT3G09020 10.0kb upstream 10.0kb upstream 11315 true Chr3: 2743307-2754621 Arabidopsis thaliana
AT3G09020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2743307-2753306 Arabidopsis thaliana
AT3G09020 10.0kb downstream 10.0kb downstream 11315 true Chr3: 2753307-2764621 Arabidopsis thaliana
AT3G09020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2754622-2764621 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368802 5261 Brassicaceae View MSA
123839292 5264 Brassicales-Malvales View MSA
124349102 5266 SBM View MSA
124244355 5268 Malvidae View MSA
124061006 5270 Rosid View MSA
123741255 5271 Pentapetalae View MSA
122792990 5272 Eudicot View MSA
122047260 5273 Angiosperm View MSA
121347765 5274 Embryophyte View MSA
123425560 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.308       High
cufflinks 3.581        
cufflinks 7.34        
cufflinks 4.705        
cufflinks 13.212        
cufflinks 2.77       Low

0 Strain