Gene : SCPL27 A. thaliana TAIR10
Primary Identifier:  ? AT3G07990 Defline:  (1 of 2) PTHR11802//PTHR11802:SF71 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED
Genomic Order:  791 Name:  ? AT3G07990
Secondary Identifier:  ? PAC:19661578
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07990 0.5kb upstream 0.5kb upstream 2945 true Chr3: 2551977-2554921 Arabidopsis thaliana
AT3G07990 0.5kb upstream 0.5kb upstream 500 false Chr3: 2551977-2552476 Arabidopsis thaliana
AT3G07990 0.5kb downstream 0.5kb downstream 2945 true Chr3: 2552477-2555421 Arabidopsis thaliana
AT3G07990 0.5kb downstream 0.5kb downstream 500 false Chr3: 2554922-2555421 Arabidopsis thaliana
AT3G07990 1.0kb upstream 1.0kb upstream 3445 true Chr3: 2551477-2554921 Arabidopsis thaliana
AT3G07990 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2551477-2552476 Arabidopsis thaliana
AT3G07990 1.0kb downstream 1.0kb downstream 3445 true Chr3: 2552477-2555921 Arabidopsis thaliana
AT3G07990 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2554922-2555921 Arabidopsis thaliana
AT3G07990 2.0kb upstream 2.0kb upstream 4445 true Chr3: 2550477-2554921 Arabidopsis thaliana
AT3G07990 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2550477-2552476 Arabidopsis thaliana
AT3G07990 2.0kb downstream 2.0kb downstream 4445 true Chr3: 2552477-2556921 Arabidopsis thaliana
AT3G07990 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2554922-2556921 Arabidopsis thaliana
AT3G07990 5.0kb upstream 5.0kb upstream 7445 true Chr3: 2547477-2554921 Arabidopsis thaliana
AT3G07990 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2547477-2552476 Arabidopsis thaliana
AT3G07990 5.0kb downstream 5.0kb downstream 7445 true Chr3: 2552477-2559921 Arabidopsis thaliana
AT3G07990 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2554922-2559921 Arabidopsis thaliana
AT3G07990 10.0kb upstream 10.0kb upstream 12445 true Chr3: 2542477-2554921 Arabidopsis thaliana
AT3G07990 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2542477-2552476 Arabidopsis thaliana
AT3G07990 10.0kb downstream 10.0kb downstream 12445 true Chr3: 2552477-2564921 Arabidopsis thaliana
AT3G07990 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2554922-2564921 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364311 5261 Brassicaceae View MSA
123829488 5264 Brassicales-Malvales View MSA
124336704 5266 SBM View MSA
124249399 5268 Malvidae View MSA
124064837 5270 Rosid View MSA
123739896 5271 Pentapetalae View MSA
122788632 5272 Eudicot View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.709        
cufflinks 22.722        
cufflinks 7.383        
cufflinks 18.896        
cufflinks 5.686       Low
cufflinks 25.157       High

0 Strain