Gene : AT3G07730 A. thaliana TAIR10
Defline:  (1 of 4) PTHR34194:SF3 - F14J8.16 PROTEIN-RELATED Genomic Order:  765
Name:  ? AT3G07730 Secondary Identifier:  ? PAC:19659554
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07730 0.5kb upstream 0.5kb upstream 1922 true Chr3: 2467685-2469606 Arabidopsis thaliana
AT3G07730 0.5kb upstream 0.5kb upstream 500 false Chr3: 2467685-2468184 Arabidopsis thaliana
AT3G07730 0.5kb downstream 0.5kb downstream 1922 true Chr3: 2468185-2470106 Arabidopsis thaliana
AT3G07730 0.5kb downstream 0.5kb downstream 500 false Chr3: 2469607-2470106 Arabidopsis thaliana
AT3G07730 1.0kb upstream 1.0kb upstream 2422 true Chr3: 2467185-2469606 Arabidopsis thaliana
AT3G07730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2467185-2468184 Arabidopsis thaliana
AT3G07730 1.0kb downstream 1.0kb downstream 2422 true Chr3: 2468185-2470606 Arabidopsis thaliana
AT3G07730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2469607-2470606 Arabidopsis thaliana
AT3G07730 2.0kb upstream 2.0kb upstream 3422 true Chr3: 2466185-2469606 Arabidopsis thaliana
AT3G07730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2466185-2468184 Arabidopsis thaliana
AT3G07730 2.0kb downstream 2.0kb downstream 3422 true Chr3: 2468185-2471606 Arabidopsis thaliana
AT3G07730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2469607-2471606 Arabidopsis thaliana
AT3G07730 5.0kb upstream 5.0kb upstream 6422 true Chr3: 2463185-2469606 Arabidopsis thaliana
AT3G07730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2463185-2468184 Arabidopsis thaliana
AT3G07730 5.0kb downstream 5.0kb downstream 6422 true Chr3: 2468185-2474606 Arabidopsis thaliana
AT3G07730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2469607-2474606 Arabidopsis thaliana
AT3G07730 10.0kb upstream 10.0kb upstream 11422 true Chr3: 2458185-2469606 Arabidopsis thaliana
AT3G07730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2458185-2468184 Arabidopsis thaliana
AT3G07730 10.0kb downstream 10.0kb downstream 11422 true Chr3: 2468185-2479606 Arabidopsis thaliana
AT3G07730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2469607-2479606 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376125 5261 Brassicaceae View MSA
123801148 5264 Brassicales-Malvales View MSA
124298484 5266 SBM View MSA
124150116 5268 Malvidae View MSA
124069664 5270 Rosid View MSA
123743436 5271 Pentapetalae View MSA
122792304 5272 Eudicot View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.114       High
cufflinks 1.802        
cufflinks 3.997        
cufflinks 1.464       Low
cufflinks 5.314       High
cufflinks 1.558        

0 Strain