Gene : AT3G07790 A. thaliana TAIR10
Defline:  (1 of 1) K13118 - protein DGCR14 (DGCR14) Genomic Order:  771
Name:  ? AT3G07790 Secondary Identifier:  ? PAC:19664746
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07790 0.5kb upstream 0.5kb upstream 2352 true Chr3: 2486869-2489220 Arabidopsis thaliana
AT3G07790 0.5kb upstream 0.5kb upstream 500 false Chr3: 2486869-2487368 Arabidopsis thaliana
AT3G07790 0.5kb downstream 0.5kb downstream 2352 true Chr3: 2487369-2489720 Arabidopsis thaliana
AT3G07790 0.5kb downstream 0.5kb downstream 500 false Chr3: 2489221-2489720 Arabidopsis thaliana
AT3G07790 1.0kb upstream 1.0kb upstream 2852 true Chr3: 2486369-2489220 Arabidopsis thaliana
AT3G07790 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2486369-2487368 Arabidopsis thaliana
AT3G07790 1.0kb downstream 1.0kb downstream 2852 true Chr3: 2487369-2490220 Arabidopsis thaliana
AT3G07790 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2489221-2490220 Arabidopsis thaliana
AT3G07790 2.0kb upstream 2.0kb upstream 3852 true Chr3: 2485369-2489220 Arabidopsis thaliana
AT3G07790 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2485369-2487368 Arabidopsis thaliana
AT3G07790 2.0kb downstream 2.0kb downstream 3852 true Chr3: 2487369-2491220 Arabidopsis thaliana
AT3G07790 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2489221-2491220 Arabidopsis thaliana
AT3G07790 5.0kb upstream 5.0kb upstream 6852 true Chr3: 2482369-2489220 Arabidopsis thaliana
AT3G07790 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2482369-2487368 Arabidopsis thaliana
AT3G07790 5.0kb downstream 5.0kb downstream 6852 true Chr3: 2487369-2494220 Arabidopsis thaliana
AT3G07790 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2489221-2494220 Arabidopsis thaliana
AT3G07790 10.0kb upstream 10.0kb upstream 11852 true Chr3: 2477369-2489220 Arabidopsis thaliana
AT3G07790 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2477369-2487368 Arabidopsis thaliana
AT3G07790 10.0kb downstream 10.0kb downstream 11852 true Chr3: 2487369-2499220 Arabidopsis thaliana
AT3G07790 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2489221-2499220 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369651 5261 Brassicaceae View MSA
123828220 5264 Brassicales-Malvales View MSA
124344576 5266 SBM View MSA
124240792 5268 Malvidae View MSA
124069100 5270 Rosid View MSA
123740213 5271 Pentapetalae View MSA
122785647 5272 Eudicot View MSA
122046377 5273 Angiosperm View MSA
121346564 5274 Embryophyte View MSA
123426374 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.583     High  
cufflinks 44.492     High  
cufflinks 37.39     High  
cufflinks 41.452     High  
cufflinks 31.817     High Low
cufflinks 44.572     High  

0 Strain