Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-1081 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G07830 0.5kb upstream | 0.5kb | upstream | 2279 | true | Chr3: 2499243-2501521 | Arabidopsis thaliana |
AT3G07830 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 2501022-2501521 | Arabidopsis thaliana |
AT3G07830 0.5kb downstream | 0.5kb | downstream | 2279 | true | Chr3: 2498743-2501021 | Arabidopsis thaliana |
AT3G07830 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 2498743-2499242 | Arabidopsis thaliana |
AT3G07830 1.0kb upstream | 1.0kb | upstream | 2779 | true | Chr3: 2499243-2502021 | Arabidopsis thaliana |
AT3G07830 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 2501022-2502021 | Arabidopsis thaliana |
AT3G07830 1.0kb downstream | 1.0kb | downstream | 2779 | true | Chr3: 2498243-2501021 | Arabidopsis thaliana |
AT3G07830 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 2498243-2499242 | Arabidopsis thaliana |
AT3G07830 2.0kb upstream | 2.0kb | upstream | 3779 | true | Chr3: 2499243-2503021 | Arabidopsis thaliana |
AT3G07830 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 2501022-2503021 | Arabidopsis thaliana |
AT3G07830 2.0kb downstream | 2.0kb | downstream | 3779 | true | Chr3: 2497243-2501021 | Arabidopsis thaliana |
AT3G07830 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 2497243-2499242 | Arabidopsis thaliana |
AT3G07830 5.0kb upstream | 5.0kb | upstream | 6779 | true | Chr3: 2499243-2506021 | Arabidopsis thaliana |
AT3G07830 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 2501022-2506021 | Arabidopsis thaliana |
AT3G07830 5.0kb downstream | 5.0kb | downstream | 6779 | true | Chr3: 2494243-2501021 | Arabidopsis thaliana |
AT3G07830 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 2494243-2499242 | Arabidopsis thaliana |
AT3G07830 10.0kb upstream | 10.0kb | upstream | 11779 | true | Chr3: 2499243-2511021 | Arabidopsis thaliana |
AT3G07830 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 2501022-2511021 | Arabidopsis thaliana |
AT3G07830 10.0kb downstream | 10.0kb | downstream | 11779 | true | Chr3: 2489243-2501021 | Arabidopsis thaliana |
AT3G07830 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 2489243-2499242 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122338746 | 5261 | Brassicaceae | View MSA |
123779295 | 5264 | Brassicales-Malvales | View MSA |
124349703 | 5266 | SBM | View MSA |
124252748 | 5268 | Malvidae | View MSA |
124074380 | 5270 | Rosid | View MSA |
123753570 | 5271 | Pentapetalae | View MSA |
122797497 | 5272 | Eudicot | View MSA |
122051291 | 5273 | Angiosperm | View MSA |
121350352 | 5274 | Embryophyte | View MSA |
123381691 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.016 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.009 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |