Gene : AIR12 A. thaliana TAIR10
Primary Identifier:  ? AT3G07390 Defline:  (1 of 3) PTHR23130//PTHR23130:SF80 - FAMILY NOT NAMED // AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12
Genomic Order:  726 Name:  ? AT3G07390
Secondary Identifier:  ? PAC:19662325
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07390 0.5kb upstream 0.5kb upstream 1696 true Chr3: 2364801-2366496 Arabidopsis thaliana
AT3G07390 0.5kb upstream 0.5kb upstream 500 false Chr3: 2364801-2365300 Arabidopsis thaliana
AT3G07390 0.5kb downstream 0.5kb downstream 1696 true Chr3: 2365301-2366996 Arabidopsis thaliana
AT3G07390 0.5kb downstream 0.5kb downstream 500 false Chr3: 2366497-2366996 Arabidopsis thaliana
AT3G07390 1.0kb upstream 1.0kb upstream 2196 true Chr3: 2364301-2366496 Arabidopsis thaliana
AT3G07390 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2364301-2365300 Arabidopsis thaliana
AT3G07390 1.0kb downstream 1.0kb downstream 2196 true Chr3: 2365301-2367496 Arabidopsis thaliana
AT3G07390 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2366497-2367496 Arabidopsis thaliana
AT3G07390 2.0kb upstream 2.0kb upstream 3196 true Chr3: 2363301-2366496 Arabidopsis thaliana
AT3G07390 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2363301-2365300 Arabidopsis thaliana
AT3G07390 2.0kb downstream 2.0kb downstream 3196 true Chr3: 2365301-2368496 Arabidopsis thaliana
AT3G07390 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2366497-2368496 Arabidopsis thaliana
AT3G07390 5.0kb upstream 5.0kb upstream 6196 true Chr3: 2360301-2366496 Arabidopsis thaliana
AT3G07390 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2360301-2365300 Arabidopsis thaliana
AT3G07390 5.0kb downstream 5.0kb downstream 6196 true Chr3: 2365301-2371496 Arabidopsis thaliana
AT3G07390 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2366497-2371496 Arabidopsis thaliana
AT3G07390 10.0kb upstream 10.0kb upstream 11196 true Chr3: 2355301-2366496 Arabidopsis thaliana
AT3G07390 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2355301-2365300 Arabidopsis thaliana
AT3G07390 10.0kb downstream 10.0kb downstream 11196 true Chr3: 2365301-2376496 Arabidopsis thaliana
AT3G07390 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2366497-2376496 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367494 5261 Brassicaceae View MSA
123838996 5264 Brassicales-Malvales View MSA
124346154 5266 SBM View MSA
124247391 5268 Malvidae View MSA
124071203 5270 Rosid View MSA
123745343 5271 Pentapetalae View MSA
122771463 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.591     High  
cufflinks 97.947     High  
cufflinks 43.11     High  
cufflinks 90.031     High  
cufflinks 42.521     High Low
cufflinks 114.803     High High

0 Strain