Gene : ULP1A A. thaliana TAIR10
Primary Identifier:  ? AT3G06910 Defline:  (1 of 1) PTHR12606//PTHR12606:SF23 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED
Genomic Order:  677 Name:  ? AT3G06910
Secondary Identifier:  ? PAC:19663826
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06910 0.5kb upstream 0.5kb upstream 3068 true Chr3: 2178630-2181697 Arabidopsis thaliana
AT3G06910 0.5kb upstream 0.5kb upstream 500 false Chr3: 2181198-2181697 Arabidopsis thaliana
AT3G06910 0.5kb downstream 0.5kb downstream 3068 true Chr3: 2178130-2181197 Arabidopsis thaliana
AT3G06910 0.5kb downstream 0.5kb downstream 500 false Chr3: 2178130-2178629 Arabidopsis thaliana
AT3G06910 1.0kb upstream 1.0kb upstream 3568 true Chr3: 2178630-2182197 Arabidopsis thaliana
AT3G06910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2181198-2182197 Arabidopsis thaliana
AT3G06910 1.0kb downstream 1.0kb downstream 3568 true Chr3: 2177630-2181197 Arabidopsis thaliana
AT3G06910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2177630-2178629 Arabidopsis thaliana
AT3G06910 2.0kb upstream 2.0kb upstream 4568 true Chr3: 2178630-2183197 Arabidopsis thaliana
AT3G06910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2181198-2183197 Arabidopsis thaliana
AT3G06910 2.0kb downstream 2.0kb downstream 4568 true Chr3: 2176630-2181197 Arabidopsis thaliana
AT3G06910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2176630-2178629 Arabidopsis thaliana
AT3G06910 5.0kb upstream 5.0kb upstream 7568 true Chr3: 2178630-2186197 Arabidopsis thaliana
AT3G06910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2181198-2186197 Arabidopsis thaliana
AT3G06910 5.0kb downstream 5.0kb downstream 7568 true Chr3: 2173630-2181197 Arabidopsis thaliana
AT3G06910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2173630-2178629 Arabidopsis thaliana
AT3G06910 10.0kb upstream 10.0kb upstream 12568 true Chr3: 2178630-2191197 Arabidopsis thaliana
AT3G06910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2181198-2191197 Arabidopsis thaliana
AT3G06910 10.0kb downstream 10.0kb downstream 12568 true Chr3: 2168630-2181197 Arabidopsis thaliana
AT3G06910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2168630-2178629 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368579 5261 Brassicaceae View MSA
123799609 5264 Brassicales-Malvales View MSA
124297111 5266 SBM View MSA
124149082 5268 Malvidae View MSA
123874960 5270 Rosid View MSA
123458857 5271 Pentapetalae View MSA
122494255 5272 Eudicot View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.438       High
cufflinks 3.903        
cufflinks 3.326        
cufflinks 4.103        
cufflinks 3.209       Low
cufflinks 3.378        

0 Strain