Gene : AT3G06410 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  617
Name:  ? AT3G06410 Secondary Identifier:  ? PAC:19658431
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06410 0.5kb upstream 0.5kb upstream 3050 true Chr3: 1947240-1950289 Arabidopsis thaliana
AT3G06410 0.5kb upstream 0.5kb upstream 500 false Chr3: 1949790-1950289 Arabidopsis thaliana
AT3G06410 0.5kb downstream 0.5kb downstream 3050 true Chr3: 1946740-1949789 Arabidopsis thaliana
AT3G06410 0.5kb downstream 0.5kb downstream 500 false Chr3: 1946740-1947239 Arabidopsis thaliana
AT3G06410 1.0kb upstream 1.0kb upstream 3550 true Chr3: 1947240-1950789 Arabidopsis thaliana
AT3G06410 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1949790-1950789 Arabidopsis thaliana
AT3G06410 1.0kb downstream 1.0kb downstream 3550 true Chr3: 1946240-1949789 Arabidopsis thaliana
AT3G06410 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1946240-1947239 Arabidopsis thaliana
AT3G06410 2.0kb upstream 2.0kb upstream 4550 true Chr3: 1947240-1951789 Arabidopsis thaliana
AT3G06410 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1949790-1951789 Arabidopsis thaliana
AT3G06410 2.0kb downstream 2.0kb downstream 4550 true Chr3: 1945240-1949789 Arabidopsis thaliana
AT3G06410 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1945240-1947239 Arabidopsis thaliana
AT3G06410 5.0kb upstream 5.0kb upstream 7550 true Chr3: 1947240-1954789 Arabidopsis thaliana
AT3G06410 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1949790-1954789 Arabidopsis thaliana
AT3G06410 5.0kb downstream 5.0kb downstream 7550 true Chr3: 1942240-1949789 Arabidopsis thaliana
AT3G06410 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1942240-1947239 Arabidopsis thaliana
AT3G06410 10.0kb upstream 10.0kb upstream 12550 true Chr3: 1947240-1959789 Arabidopsis thaliana
AT3G06410 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1949790-1959789 Arabidopsis thaliana
AT3G06410 10.0kb downstream 10.0kb downstream 12550 true Chr3: 1937240-1949789 Arabidopsis thaliana
AT3G06410 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1937240-1947239 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372213 5261 Brassicaceae View MSA
123836159 5264 Brassicales-Malvales View MSA
124338324 5266 SBM View MSA
124244346 5268 Malvidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.095       Low
cufflinks 14.464        
cufflinks 8.432        
cufflinks 14.12        
cufflinks 8.492        
cufflinks 14.834        

0 Strain