Gene : AT3G06660 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21561:SF12 - INO80 COMPLEX SUBUNIT B Genomic Order:  651
Name:  ? AT3G06660 Secondary Identifier:  ? PAC:19664766
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06660 0.5kb upstream 0.5kb upstream 3005 true Chr3: 2101902-2104906 Arabidopsis thaliana
AT3G06660 0.5kb upstream 0.5kb upstream 500 false Chr3: 2101902-2102401 Arabidopsis thaliana
AT3G06660 0.5kb downstream 0.5kb downstream 3005 true Chr3: 2102402-2105406 Arabidopsis thaliana
AT3G06660 0.5kb downstream 0.5kb downstream 500 false Chr3: 2104907-2105406 Arabidopsis thaliana
AT3G06660 1.0kb upstream 1.0kb upstream 3505 true Chr3: 2101402-2104906 Arabidopsis thaliana
AT3G06660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2101402-2102401 Arabidopsis thaliana
AT3G06660 1.0kb downstream 1.0kb downstream 3505 true Chr3: 2102402-2105906 Arabidopsis thaliana
AT3G06660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2104907-2105906 Arabidopsis thaliana
AT3G06660 2.0kb upstream 2.0kb upstream 4505 true Chr3: 2100402-2104906 Arabidopsis thaliana
AT3G06660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2100402-2102401 Arabidopsis thaliana
AT3G06660 2.0kb downstream 2.0kb downstream 4505 true Chr3: 2102402-2106906 Arabidopsis thaliana
AT3G06660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2104907-2106906 Arabidopsis thaliana
AT3G06660 5.0kb upstream 5.0kb upstream 7505 true Chr3: 2097402-2104906 Arabidopsis thaliana
AT3G06660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2097402-2102401 Arabidopsis thaliana
AT3G06660 5.0kb downstream 5.0kb downstream 7505 true Chr3: 2102402-2109906 Arabidopsis thaliana
AT3G06660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2104907-2109906 Arabidopsis thaliana
AT3G06660 10.0kb upstream 10.0kb upstream 12505 true Chr3: 2092402-2104906 Arabidopsis thaliana
AT3G06660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2092402-2102401 Arabidopsis thaliana
AT3G06660 10.0kb downstream 10.0kb downstream 12505 true Chr3: 2102402-2114906 Arabidopsis thaliana
AT3G06660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2104907-2114906 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
122372311 5261 Brassicaceae View MSA
123834962 5264 Brassicales-Malvales View MSA
124341851 5266 SBM View MSA
124239412 5268 Malvidae View MSA
124069282 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.393       High
cufflinks 3.221        
cufflinks 3.159        
cufflinks 3.225        
cufflinks 3.286        
cufflinks 2.824       Low

0 Strain