Gene : GID1A A. thaliana TAIR10
Primary Identifier:  ? AT3G05120 Defline:  (1 of 3) K14493 - gibberellin receptor GID1 (GID1)
Genomic Order:  465 Name:  ? AT3G05120
Secondary Identifier:  ? PAC:19663064
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6303 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05120 0.5kb upstream 0.5kb upstream 2808 true Chr3: 1429971-1432778 Arabidopsis thaliana
AT3G05120 0.5kb upstream 0.5kb upstream 500 false Chr3: 1429971-1430470 Arabidopsis thaliana
AT3G05120 0.5kb downstream 0.5kb downstream 2808 true Chr3: 1430471-1433278 Arabidopsis thaliana
AT3G05120 0.5kb downstream 0.5kb downstream 500 false Chr3: 1432779-1433278 Arabidopsis thaliana
AT3G05120 1.0kb upstream 1.0kb upstream 3308 true Chr3: 1429471-1432778 Arabidopsis thaliana
AT3G05120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1429471-1430470 Arabidopsis thaliana
AT3G05120 1.0kb downstream 1.0kb downstream 3308 true Chr3: 1430471-1433778 Arabidopsis thaliana
AT3G05120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1432779-1433778 Arabidopsis thaliana
AT3G05120 2.0kb upstream 2.0kb upstream 4308 true Chr3: 1428471-1432778 Arabidopsis thaliana
AT3G05120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1428471-1430470 Arabidopsis thaliana
AT3G05120 2.0kb downstream 2.0kb downstream 4308 true Chr3: 1430471-1434778 Arabidopsis thaliana
AT3G05120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1432779-1434778 Arabidopsis thaliana
AT3G05120 5.0kb upstream 5.0kb upstream 7308 true Chr3: 1425471-1432778 Arabidopsis thaliana
AT3G05120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1425471-1430470 Arabidopsis thaliana
AT3G05120 5.0kb downstream 5.0kb downstream 7308 true Chr3: 1430471-1437778 Arabidopsis thaliana
AT3G05120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1432779-1437778 Arabidopsis thaliana
AT3G05120 10.0kb upstream 10.0kb upstream 12308 true Chr3: 1420471-1432778 Arabidopsis thaliana
AT3G05120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1420471-1430470 Arabidopsis thaliana
AT3G05120 10.0kb downstream 10.0kb downstream 12308 true Chr3: 1430471-1442778 Arabidopsis thaliana
AT3G05120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1432779-1442778 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374731 5261 Brassicaceae View MSA
123837846 5264 Brassicales-Malvales View MSA
124344141 5266 SBM View MSA
124250011 5268 Malvidae View MSA
124068362 5270 Rosid View MSA
123741426 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.508       Low
cufflinks 48.36     High High
cufflinks 16.134        
cufflinks 46.356     High  
cufflinks 14.534        
cufflinks 40.648     High  

0 Strain