Gene : AT3G04990 A. thaliana TAIR10

Genomic Order:  451 Name:  ? AT3G04990
Secondary Identifier:  ? PAC:19659200

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04990 0.5kb upstream 0.5kb upstream 1184 true Chr3: 1383996-1385179 Arabidopsis thaliana
AT3G04990 0.5kb upstream 0.5kb upstream 500 false Chr3: 1384680-1385179 Arabidopsis thaliana
AT3G04990 0.5kb downstream 0.5kb downstream 1184 true Chr3: 1383496-1384679 Arabidopsis thaliana
AT3G04990 0.5kb downstream 0.5kb downstream 500 false Chr3: 1383496-1383995 Arabidopsis thaliana
AT3G04990 1.0kb upstream 1.0kb upstream 1684 true Chr3: 1383996-1385679 Arabidopsis thaliana
AT3G04990 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1384680-1385679 Arabidopsis thaliana
AT3G04990 1.0kb downstream 1.0kb downstream 1684 true Chr3: 1382996-1384679 Arabidopsis thaliana
AT3G04990 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1382996-1383995 Arabidopsis thaliana
AT3G04990 2.0kb upstream 2.0kb upstream 2684 true Chr3: 1383996-1386679 Arabidopsis thaliana
AT3G04990 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1384680-1386679 Arabidopsis thaliana
AT3G04990 2.0kb downstream 2.0kb downstream 2684 true Chr3: 1381996-1384679 Arabidopsis thaliana
AT3G04990 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1381996-1383995 Arabidopsis thaliana
AT3G04990 5.0kb upstream 5.0kb upstream 5684 true Chr3: 1383996-1389679 Arabidopsis thaliana
AT3G04990 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1384680-1389679 Arabidopsis thaliana
AT3G04990 5.0kb downstream 5.0kb downstream 5684 true Chr3: 1378996-1384679 Arabidopsis thaliana
AT3G04990 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1378996-1383995 Arabidopsis thaliana
AT3G04990 10.0kb upstream 10.0kb upstream 10684 true Chr3: 1383996-1394679 Arabidopsis thaliana
AT3G04990 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1384680-1394679 Arabidopsis thaliana
AT3G04990 10.0kb downstream 10.0kb downstream 10684 true Chr3: 1373996-1384679 Arabidopsis thaliana
AT3G04990 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1373996-1383995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343680 5261 Brassicaceae View MSA
123783803 5264 Brassicales-Malvales View MSA
124282016 5266 SBM View MSA
124136679 5268 Malvidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain