Gene : AT3G04840 A. thaliana TAIR10
Defline:  (1 of 2) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  431
Name:  ? AT3G04840 Secondary Identifier:  ? PAC:19663969
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04840 0.5kb upstream 0.5kb upstream 2453 true Chr3: 1329165-1331617 Arabidopsis thaliana
AT3G04840 0.5kb upstream 0.5kb upstream 500 false Chr3: 1329165-1329664 Arabidopsis thaliana
AT3G04840 0.5kb downstream 0.5kb downstream 2453 true Chr3: 1329665-1332117 Arabidopsis thaliana
AT3G04840 0.5kb downstream 0.5kb downstream 500 false Chr3: 1331618-1332117 Arabidopsis thaliana
AT3G04840 1.0kb upstream 1.0kb upstream 2953 true Chr3: 1328665-1331617 Arabidopsis thaliana
AT3G04840 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1328665-1329664 Arabidopsis thaliana
AT3G04840 1.0kb downstream 1.0kb downstream 2953 true Chr3: 1329665-1332617 Arabidopsis thaliana
AT3G04840 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1331618-1332617 Arabidopsis thaliana
AT3G04840 2.0kb upstream 2.0kb upstream 3953 true Chr3: 1327665-1331617 Arabidopsis thaliana
AT3G04840 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1327665-1329664 Arabidopsis thaliana
AT3G04840 2.0kb downstream 2.0kb downstream 3953 true Chr3: 1329665-1333617 Arabidopsis thaliana
AT3G04840 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1331618-1333617 Arabidopsis thaliana
AT3G04840 5.0kb upstream 5.0kb upstream 6953 true Chr3: 1324665-1331617 Arabidopsis thaliana
AT3G04840 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1324665-1329664 Arabidopsis thaliana
AT3G04840 5.0kb downstream 5.0kb downstream 6953 true Chr3: 1329665-1336617 Arabidopsis thaliana
AT3G04840 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1331618-1336617 Arabidopsis thaliana
AT3G04840 10.0kb upstream 10.0kb upstream 11953 true Chr3: 1319665-1331617 Arabidopsis thaliana
AT3G04840 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1319665-1329664 Arabidopsis thaliana
AT3G04840 10.0kb downstream 10.0kb downstream 11953 true Chr3: 1329665-1341617 Arabidopsis thaliana
AT3G04840 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1331618-1341617 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380172 5261 Brassicaceae View MSA
123837466 5264 Brassicales-Malvales View MSA
124347427 5266 SBM View MSA
124244111 5268 Malvidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 189.843     High  
cufflinks 188.091     High  
cufflinks 175.292     High  
cufflinks 220.835     High  
cufflinks 136.165     High Low
cufflinks 257.306     High High

0 Strain