Gene : HTA13 A. thaliana TAIR10
Primary Identifier:  ? AT3G20670 Defline:  (1 of 13) K11251 - histone H2A (H2A)
Genomic Order:  2151 Name:  ? AT3G20670
Secondary Identifier:  ? PAC:19658800
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20670 0.5kb upstream 0.5kb upstream 1240 true Chr3: 7228907-7230146 Arabidopsis thaliana
AT3G20670 0.5kb upstream 0.5kb upstream 500 false Chr3: 7228907-7229406 Arabidopsis thaliana
AT3G20670 0.5kb downstream 0.5kb downstream 1240 true Chr3: 7229407-7230646 Arabidopsis thaliana
AT3G20670 0.5kb downstream 0.5kb downstream 500 false Chr3: 7230147-7230646 Arabidopsis thaliana
AT3G20670 1.0kb upstream 1.0kb upstream 1740 true Chr3: 7228407-7230146 Arabidopsis thaliana
AT3G20670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7228407-7229406 Arabidopsis thaliana
AT3G20670 1.0kb downstream 1.0kb downstream 1740 true Chr3: 7229407-7231146 Arabidopsis thaliana
AT3G20670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7230147-7231146 Arabidopsis thaliana
AT3G20670 2.0kb upstream 2.0kb upstream 2740 true Chr3: 7227407-7230146 Arabidopsis thaliana
AT3G20670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7227407-7229406 Arabidopsis thaliana
AT3G20670 2.0kb downstream 2.0kb downstream 2740 true Chr3: 7229407-7232146 Arabidopsis thaliana
AT3G20670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7230147-7232146 Arabidopsis thaliana
AT3G20670 5.0kb upstream 5.0kb upstream 5740 true Chr3: 7224407-7230146 Arabidopsis thaliana
AT3G20670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7224407-7229406 Arabidopsis thaliana
AT3G20670 5.0kb downstream 5.0kb downstream 5740 true Chr3: 7229407-7235146 Arabidopsis thaliana
AT3G20670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7230147-7235146 Arabidopsis thaliana
AT3G20670 10.0kb upstream 10.0kb upstream 10740 true Chr3: 7219407-7230146 Arabidopsis thaliana
AT3G20670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7219407-7229406 Arabidopsis thaliana
AT3G20670 10.0kb downstream 10.0kb downstream 10740 true Chr3: 7229407-7240146 Arabidopsis thaliana
AT3G20670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7230147-7240146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380368 5261 Brassicaceae View MSA
123840561 5264 Brassicales-Malvales View MSA
124337241 5266 SBM View MSA
124240276 5268 Malvidae View MSA
124063341 5270 Rosid View MSA
123745696 5271 Pentapetalae View MSA
122790342 5272 Eudicot View MSA
122050010 5273 Angiosperm View MSA
121343825 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.595     High High
cufflinks 24.071        
cufflinks 19.084       Low
cufflinks 31.236     High  
cufflinks 21.538        
cufflinks 32.686     High  

0 Strain