Gene : IAA16 A. thaliana TAIR10
Primary Identifier:  ? AT3G04730 Defline:  (1 of 1) PTHR31734//PTHR31734:SF28 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN IAA16
Genomic Order:  418 Name:  ? AT3G04730
Secondary Identifier:  ? PAC:19661897
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04730 0.5kb upstream 0.5kb upstream 2491 true Chr3: 1288612-1291102 Arabidopsis thaliana
AT3G04730 0.5kb upstream 0.5kb upstream 500 false Chr3: 1290603-1291102 Arabidopsis thaliana
AT3G04730 0.5kb downstream 0.5kb downstream 2491 true Chr3: 1288112-1290602 Arabidopsis thaliana
AT3G04730 0.5kb downstream 0.5kb downstream 500 false Chr3: 1288112-1288611 Arabidopsis thaliana
AT3G04730 1.0kb upstream 1.0kb upstream 2991 true Chr3: 1288612-1291602 Arabidopsis thaliana
AT3G04730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1290603-1291602 Arabidopsis thaliana
AT3G04730 1.0kb downstream 1.0kb downstream 2991 true Chr3: 1287612-1290602 Arabidopsis thaliana
AT3G04730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1287612-1288611 Arabidopsis thaliana
AT3G04730 2.0kb upstream 2.0kb upstream 3991 true Chr3: 1288612-1292602 Arabidopsis thaliana
AT3G04730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1290603-1292602 Arabidopsis thaliana
AT3G04730 2.0kb downstream 2.0kb downstream 3991 true Chr3: 1286612-1290602 Arabidopsis thaliana
AT3G04730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1286612-1288611 Arabidopsis thaliana
AT3G04730 5.0kb upstream 5.0kb upstream 6991 true Chr3: 1288612-1295602 Arabidopsis thaliana
AT3G04730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1290603-1295602 Arabidopsis thaliana
AT3G04730 5.0kb downstream 5.0kb downstream 6991 true Chr3: 1283612-1290602 Arabidopsis thaliana
AT3G04730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1283612-1288611 Arabidopsis thaliana
AT3G04730 10.0kb upstream 10.0kb upstream 11991 true Chr3: 1288612-1300602 Arabidopsis thaliana
AT3G04730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1290603-1300602 Arabidopsis thaliana
AT3G04730 10.0kb downstream 10.0kb downstream 11991 true Chr3: 1278612-1290602 Arabidopsis thaliana
AT3G04730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1278612-1288611 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376618 5261 Brassicaceae View MSA
123827922 5264 Brassicales-Malvales View MSA
124339044 5266 SBM View MSA
124239552 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.037     High Low
cufflinks 85.968     High  
cufflinks 63.916     High  
cufflinks 95.973     High High
cufflinks 65.536     High  
cufflinks 84.216     High  

0 Strain