Gene : AT3G50390 A. thaliana TAIR10
Defline:  (1 of 1) KOG0265//KOG0279//KOG0315 - U5 snRNP-specific protein-like factor and related proteins // G protein beta subunit-like protein // G-protein beta subunit-like protein (contains WD40 repeats) Genomic Order:  4048
Name:  ? AT3G50390 Secondary Identifier:  ? PAC:19658788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G50390 0.5kb upstream 0.5kb upstream 2046 true Chr3: 18701574-18703619 Arabidopsis thaliana
AT3G50390 0.5kb upstream 0.5kb upstream 500 false Chr3: 18701574-18702073 Arabidopsis thaliana
AT3G50390 0.5kb downstream 0.5kb downstream 2046 true Chr3: 18702074-18704119 Arabidopsis thaliana
AT3G50390 0.5kb downstream 0.5kb downstream 500 false Chr3: 18703620-18704119 Arabidopsis thaliana
AT3G50390 1.0kb upstream 1.0kb upstream 2546 true Chr3: 18701074-18703619 Arabidopsis thaliana
AT3G50390 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18701074-18702073 Arabidopsis thaliana
AT3G50390 1.0kb downstream 1.0kb downstream 2546 true Chr3: 18702074-18704619 Arabidopsis thaliana
AT3G50390 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18703620-18704619 Arabidopsis thaliana
AT3G50390 2.0kb upstream 2.0kb upstream 3546 true Chr3: 18700074-18703619 Arabidopsis thaliana
AT3G50390 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18700074-18702073 Arabidopsis thaliana
AT3G50390 2.0kb downstream 2.0kb downstream 3546 true Chr3: 18702074-18705619 Arabidopsis thaliana
AT3G50390 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18703620-18705619 Arabidopsis thaliana
AT3G50390 5.0kb upstream 5.0kb upstream 6546 true Chr3: 18697074-18703619 Arabidopsis thaliana
AT3G50390 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18697074-18702073 Arabidopsis thaliana
AT3G50390 5.0kb downstream 5.0kb downstream 6546 true Chr3: 18702074-18708619 Arabidopsis thaliana
AT3G50390 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18703620-18708619 Arabidopsis thaliana
AT3G50390 10.0kb upstream 10.0kb upstream 11546 true Chr3: 18692074-18703619 Arabidopsis thaliana
AT3G50390 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18692074-18702073 Arabidopsis thaliana
AT3G50390 10.0kb downstream 10.0kb downstream 11546 true Chr3: 18702074-18713619 Arabidopsis thaliana
AT3G50390 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18703620-18713619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367564 5261 Brassicaceae View MSA
123839384 5264 Brassicales-Malvales View MSA
124346237 5266 SBM View MSA
124242603 5268 Malvidae View MSA
124072112 5270 Rosid View MSA
123752905 5271 Pentapetalae View MSA
122794540 5272 Eudicot View MSA
122049001 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141     Low  
cufflinks 0.088     Low  
cufflinks 0.194     Low  
cufflinks 0.05     Low Low
cufflinks 0.313       High
cufflinks 0.109     Low  

0 Strain