Gene : AT3G50560 A. thaliana TAIR10
Defline:  (1 of 5) 1.1.1.62 - 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase Genomic Order:  4064
Name:  ? AT3G50560 Secondary Identifier:  ? PAC:19664678
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G50560 0.5kb upstream 0.5kb upstream 3429 true Chr3: 18761088-18764516 Arabidopsis thaliana
AT3G50560 0.5kb upstream 0.5kb upstream 500 false Chr3: 18764017-18764516 Arabidopsis thaliana
AT3G50560 0.5kb downstream 0.5kb downstream 3429 true Chr3: 18760588-18764016 Arabidopsis thaliana
AT3G50560 0.5kb downstream 0.5kb downstream 500 false Chr3: 18760588-18761087 Arabidopsis thaliana
AT3G50560 1.0kb upstream 1.0kb upstream 3929 true Chr3: 18761088-18765016 Arabidopsis thaliana
AT3G50560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18764017-18765016 Arabidopsis thaliana
AT3G50560 1.0kb downstream 1.0kb downstream 3929 true Chr3: 18760088-18764016 Arabidopsis thaliana
AT3G50560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18760088-18761087 Arabidopsis thaliana
AT3G50560 2.0kb upstream 2.0kb upstream 4929 true Chr3: 18761088-18766016 Arabidopsis thaliana
AT3G50560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18764017-18766016 Arabidopsis thaliana
AT3G50560 2.0kb downstream 2.0kb downstream 4929 true Chr3: 18759088-18764016 Arabidopsis thaliana
AT3G50560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18759088-18761087 Arabidopsis thaliana
AT3G50560 5.0kb upstream 5.0kb upstream 7929 true Chr3: 18761088-18769016 Arabidopsis thaliana
AT3G50560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18764017-18769016 Arabidopsis thaliana
AT3G50560 5.0kb downstream 5.0kb downstream 7929 true Chr3: 18756088-18764016 Arabidopsis thaliana
AT3G50560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18756088-18761087 Arabidopsis thaliana
AT3G50560 10.0kb upstream 10.0kb upstream 12929 true Chr3: 18761088-18774016 Arabidopsis thaliana
AT3G50560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18764017-18774016 Arabidopsis thaliana
AT3G50560 10.0kb downstream 10.0kb downstream 12929 true Chr3: 18751088-18764016 Arabidopsis thaliana
AT3G50560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18751088-18761087 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378473 5261 Brassicaceae View MSA
123832562 5264 Brassicales-Malvales View MSA
124346618 5266 SBM View MSA
124243671 5268 Malvidae View MSA
124050243 5270 Rosid View MSA
123736848 5271 Pentapetalae View MSA
122788663 5272 Eudicot View MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08       High
cufflinks 0.258     Low  
cufflinks 0.964        
cufflinks 0.209     Low  
cufflinks 0.632        
cufflinks 0.141     Low Low

0 Strain