Gene : MAPKKK20 A. thaliana TAIR10
Primary Identifier:  ? AT3G50310 Defline:  (1 of 3) PTHR24361:SF334 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19-RELATED
Genomic Order:  4038 Name:  ? AT3G50310
Secondary Identifier:  ? PAC:19661760
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G50310 0.5kb upstream 0.5kb upstream 1871 true Chr3: 18648151-18650021 Arabidopsis thaliana
AT3G50310 0.5kb upstream 0.5kb upstream 500 false Chr3: 18649522-18650021 Arabidopsis thaliana
AT3G50310 0.5kb downstream 0.5kb downstream 1871 true Chr3: 18647651-18649521 Arabidopsis thaliana
AT3G50310 0.5kb downstream 0.5kb downstream 500 false Chr3: 18647651-18648150 Arabidopsis thaliana
AT3G50310 1.0kb upstream 1.0kb upstream 2371 true Chr3: 18648151-18650521 Arabidopsis thaliana
AT3G50310 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18649522-18650521 Arabidopsis thaliana
AT3G50310 1.0kb downstream 1.0kb downstream 2371 true Chr3: 18647151-18649521 Arabidopsis thaliana
AT3G50310 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18647151-18648150 Arabidopsis thaliana
AT3G50310 2.0kb upstream 2.0kb upstream 3371 true Chr3: 18648151-18651521 Arabidopsis thaliana
AT3G50310 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18649522-18651521 Arabidopsis thaliana
AT3G50310 2.0kb downstream 2.0kb downstream 3371 true Chr3: 18646151-18649521 Arabidopsis thaliana
AT3G50310 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18646151-18648150 Arabidopsis thaliana
AT3G50310 5.0kb upstream 5.0kb upstream 6371 true Chr3: 18648151-18654521 Arabidopsis thaliana
AT3G50310 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18649522-18654521 Arabidopsis thaliana
AT3G50310 5.0kb downstream 5.0kb downstream 6371 true Chr3: 18643151-18649521 Arabidopsis thaliana
AT3G50310 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18643151-18648150 Arabidopsis thaliana
AT3G50310 10.0kb upstream 10.0kb upstream 11371 true Chr3: 18648151-18659521 Arabidopsis thaliana
AT3G50310 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18649522-18659521 Arabidopsis thaliana
AT3G50310 10.0kb downstream 10.0kb downstream 11371 true Chr3: 18638151-18649521 Arabidopsis thaliana
AT3G50310 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18638151-18648150 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374080 5261 Brassicaceae View MSA
123840602 5264 Brassicales-Malvales View MSA
124340230 5266 SBM View MSA
124254057 5268 Malvidae View MSA
124073880 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.094     Low Low
cufflinks 0.343        
cufflinks 0.257     Low  
cufflinks 0.637       High
cufflinks 0.428        
cufflinks 0.093     Low Low

0 Strain