Gene : AT3G49040 A. thaliana TAIR10
Defline:  (1 of 68) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  3898
Name:  ? AT3G49040 Secondary Identifier:  ? PAC:19663220
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49040 0.5kb upstream 0.5kb upstream 2164 true Chr3: 18177176-18179339 Arabidopsis thaliana
AT3G49040 0.5kb upstream 0.5kb upstream 500 false Chr3: 18177176-18177675 Arabidopsis thaliana
AT3G49040 0.5kb downstream 0.5kb downstream 2164 true Chr3: 18177676-18179839 Arabidopsis thaliana
AT3G49040 0.5kb downstream 0.5kb downstream 500 false Chr3: 18179340-18179839 Arabidopsis thaliana
AT3G49040 1.0kb upstream 1.0kb upstream 2664 true Chr3: 18176676-18179339 Arabidopsis thaliana
AT3G49040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18176676-18177675 Arabidopsis thaliana
AT3G49040 1.0kb downstream 1.0kb downstream 2664 true Chr3: 18177676-18180339 Arabidopsis thaliana
AT3G49040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18179340-18180339 Arabidopsis thaliana
AT3G49040 2.0kb upstream 2.0kb upstream 3664 true Chr3: 18175676-18179339 Arabidopsis thaliana
AT3G49040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18175676-18177675 Arabidopsis thaliana
AT3G49040 2.0kb downstream 2.0kb downstream 3664 true Chr3: 18177676-18181339 Arabidopsis thaliana
AT3G49040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18179340-18181339 Arabidopsis thaliana
AT3G49040 5.0kb upstream 5.0kb upstream 6664 true Chr3: 18172676-18179339 Arabidopsis thaliana
AT3G49040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18172676-18177675 Arabidopsis thaliana
AT3G49040 5.0kb downstream 5.0kb downstream 6664 true Chr3: 18177676-18184339 Arabidopsis thaliana
AT3G49040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18179340-18184339 Arabidopsis thaliana
AT3G49040 10.0kb upstream 10.0kb upstream 11664 true Chr3: 18167676-18179339 Arabidopsis thaliana
AT3G49040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18167676-18177675 Arabidopsis thaliana
AT3G49040 10.0kb downstream 10.0kb downstream 11664 true Chr3: 18177676-18189339 Arabidopsis thaliana
AT3G49040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18179340-18189339 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499832 5273 Angiosperm View MSA
122338735 5261 Brassicaceae View MSA
123779285 5264 Brassicales-Malvales View MSA
124277614 5266 SBM View MSA
124132801 5268 Malvidae View MSA
123861062 5270 Rosid View MSA
123446633 5271 Pentapetalae View MSA
122482180 5272 Eudicot View MSA
120773166 5274 Embryophyte View MSA
122815488 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain