Gene : ALDH10A9 A. thaliana TAIR10
Primary Identifier:  ? AT3G48170 Defline:  (1 of 2) 1.2.1.8 - Betaine-aldehyde dehydrogenase / Betaine aldehyde oxidase
Genomic Order:  3802 Name:  ? AT3G48170
Secondary Identifier:  ? PAC:19660982
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY1F-353 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48170 0.5kb upstream 0.5kb upstream 4369 true Chr3: 17786140-17790508 Arabidopsis thaliana
AT3G48170 0.5kb upstream 0.5kb upstream 500 false Chr3: 17790009-17790508 Arabidopsis thaliana
AT3G48170 0.5kb downstream 0.5kb downstream 4369 true Chr3: 17785640-17790008 Arabidopsis thaliana
AT3G48170 0.5kb downstream 0.5kb downstream 500 false Chr3: 17785640-17786139 Arabidopsis thaliana
AT3G48170 1.0kb upstream 1.0kb upstream 4869 true Chr3: 17786140-17791008 Arabidopsis thaliana
AT3G48170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17790009-17791008 Arabidopsis thaliana
AT3G48170 1.0kb downstream 1.0kb downstream 4869 true Chr3: 17785140-17790008 Arabidopsis thaliana
AT3G48170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17785140-17786139 Arabidopsis thaliana
AT3G48170 2.0kb upstream 2.0kb upstream 5869 true Chr3: 17786140-17792008 Arabidopsis thaliana
AT3G48170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17790009-17792008 Arabidopsis thaliana
AT3G48170 2.0kb downstream 2.0kb downstream 5869 true Chr3: 17784140-17790008 Arabidopsis thaliana
AT3G48170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17784140-17786139 Arabidopsis thaliana
AT3G48170 5.0kb upstream 5.0kb upstream 8869 true Chr3: 17786140-17795008 Arabidopsis thaliana
AT3G48170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17790009-17795008 Arabidopsis thaliana
AT3G48170 5.0kb downstream 5.0kb downstream 8869 true Chr3: 17781140-17790008 Arabidopsis thaliana
AT3G48170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17781140-17786139 Arabidopsis thaliana
AT3G48170 10.0kb upstream 10.0kb upstream 13869 true Chr3: 17786140-17800008 Arabidopsis thaliana
AT3G48170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17790009-17800008 Arabidopsis thaliana
AT3G48170 10.0kb downstream 10.0kb downstream 13869 true Chr3: 17776140-17790008 Arabidopsis thaliana
AT3G48170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17776140-17786139 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368114 5261 Brassicaceae View MSA
123799492 5264 Brassicales-Malvales View MSA
124297008 5266 SBM View MSA
124244269 5268 Malvidae View MSA
124063957 5270 Rosid View MSA
123742074 5271 Pentapetalae View MSA
122792963 5272 Eudicot View MSA
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.731       Low
cufflinks 22.996        
cufflinks 22.799        
cufflinks 22.704        
cufflinks 25.177       High
cufflinks 22.675        

0 Strain