Gene : AT3G47830 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10359//PTHR10359:SF31 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DNA GLYCOSYLASE SUPERFAMILY PROTEIN Genomic Order:  3768
Name:  ? AT3G47830 Secondary Identifier:  ? PAC:19662862
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47830 0.5kb upstream 0.5kb upstream 1778 true Chr3: 17646569-17648346 Arabidopsis thaliana
AT3G47830 0.5kb upstream 0.5kb upstream 500 false Chr3: 17646569-17647068 Arabidopsis thaliana
AT3G47830 0.5kb downstream 0.5kb downstream 1778 true Chr3: 17647069-17648846 Arabidopsis thaliana
AT3G47830 0.5kb downstream 0.5kb downstream 500 false Chr3: 17648347-17648846 Arabidopsis thaliana
AT3G47830 1.0kb upstream 1.0kb upstream 2278 true Chr3: 17646069-17648346 Arabidopsis thaliana
AT3G47830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17646069-17647068 Arabidopsis thaliana
AT3G47830 1.0kb downstream 1.0kb downstream 2278 true Chr3: 17647069-17649346 Arabidopsis thaliana
AT3G47830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17648347-17649346 Arabidopsis thaliana
AT3G47830 2.0kb upstream 2.0kb upstream 3278 true Chr3: 17645069-17648346 Arabidopsis thaliana
AT3G47830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17645069-17647068 Arabidopsis thaliana
AT3G47830 2.0kb downstream 2.0kb downstream 3278 true Chr3: 17647069-17650346 Arabidopsis thaliana
AT3G47830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17648347-17650346 Arabidopsis thaliana
AT3G47830 5.0kb upstream 5.0kb upstream 6278 true Chr3: 17642069-17648346 Arabidopsis thaliana
AT3G47830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17642069-17647068 Arabidopsis thaliana
AT3G47830 5.0kb downstream 5.0kb downstream 6278 true Chr3: 17647069-17653346 Arabidopsis thaliana
AT3G47830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17648347-17653346 Arabidopsis thaliana
AT3G47830 10.0kb upstream 10.0kb upstream 11278 true Chr3: 17637069-17648346 Arabidopsis thaliana
AT3G47830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17637069-17647068 Arabidopsis thaliana
AT3G47830 10.0kb downstream 10.0kb downstream 11278 true Chr3: 17647069-17658346 Arabidopsis thaliana
AT3G47830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17648347-17658346 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372827 5261 Brassicaceae View MSA
123836449 5264 Brassicales-Malvales View MSA
124342612 5266 SBM View MSA
124243028 5268 Malvidae View MSA
124061691 5270 Rosid View MSA
123751615 5271 Pentapetalae View MSA
122787983 5272 Eudicot View MSA
122044120 5273 Angiosperm View MSA
121310241 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.442        
cufflinks 1.418        
cufflinks 0.955       Low
cufflinks 1.651       High
cufflinks 0.999       Low
cufflinks 1.31        

0 Strain