Gene : AT3G45680 A. thaliana TAIR10
Defline:  (1 of 7) PTHR11654//PTHR11654:SF19 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 2.1-RELATED Genomic Order:  3550
Name:  ? AT3G45680 Secondary Identifier:  ? PAC:19661892
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45680 0.5kb upstream 0.5kb upstream 2598 true Chr3: 16770433-16773030 Arabidopsis thaliana
AT3G45680 0.5kb upstream 0.5kb upstream 500 false Chr3: 16770433-16770932 Arabidopsis thaliana
AT3G45680 0.5kb downstream 0.5kb downstream 2598 true Chr3: 16770933-16773530 Arabidopsis thaliana
AT3G45680 0.5kb downstream 0.5kb downstream 500 false Chr3: 16773031-16773530 Arabidopsis thaliana
AT3G45680 1.0kb upstream 1.0kb upstream 3098 true Chr3: 16769933-16773030 Arabidopsis thaliana
AT3G45680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16769933-16770932 Arabidopsis thaliana
AT3G45680 1.0kb downstream 1.0kb downstream 3098 true Chr3: 16770933-16774030 Arabidopsis thaliana
AT3G45680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16773031-16774030 Arabidopsis thaliana
AT3G45680 2.0kb upstream 2.0kb upstream 4098 true Chr3: 16768933-16773030 Arabidopsis thaliana
AT3G45680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16768933-16770932 Arabidopsis thaliana
AT3G45680 2.0kb downstream 2.0kb downstream 4098 true Chr3: 16770933-16775030 Arabidopsis thaliana
AT3G45680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16773031-16775030 Arabidopsis thaliana
AT3G45680 5.0kb upstream 5.0kb upstream 7098 true Chr3: 16765933-16773030 Arabidopsis thaliana
AT3G45680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16765933-16770932 Arabidopsis thaliana
AT3G45680 5.0kb downstream 5.0kb downstream 7098 true Chr3: 16770933-16778030 Arabidopsis thaliana
AT3G45680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16773031-16778030 Arabidopsis thaliana
AT3G45680 10.0kb upstream 10.0kb upstream 12098 true Chr3: 16760933-16773030 Arabidopsis thaliana
AT3G45680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16760933-16770932 Arabidopsis thaliana
AT3G45680 10.0kb downstream 10.0kb downstream 12098 true Chr3: 16770933-16783030 Arabidopsis thaliana
AT3G45680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16773031-16783030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380745 5261 Brassicaceae View MSA
123802877 5264 Brassicales-Malvales View MSA
124300038 5266 SBM View MSA
124151313 5268 Malvidae View MSA
124061783 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.494        
cufflinks 5.388        
cufflinks 0.248     Low Low
cufflinks 7.0        
cufflinks 0.346        
cufflinks 7.662        

0 Strain