Gene : AT3G44170 A. thaliana TAIR10
Defline:  (1 of 66) PF05938 - Plant self-incompatibility protein S1 Genomic Order:  3390
Name:  ? AT3G44170 Secondary Identifier:  ? PAC:19659508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44170 0.5kb upstream 0.5kb upstream 968 true Chr3: 15894290-15895257 Arabidopsis thaliana
AT3G44170 0.5kb upstream 0.5kb upstream 500 false Chr3: 15894290-15894789 Arabidopsis thaliana
AT3G44170 0.5kb downstream 0.5kb downstream 968 true Chr3: 15894790-15895757 Arabidopsis thaliana
AT3G44170 0.5kb downstream 0.5kb downstream 500 false Chr3: 15895258-15895757 Arabidopsis thaliana
AT3G44170 1.0kb upstream 1.0kb upstream 1468 true Chr3: 15893790-15895257 Arabidopsis thaliana
AT3G44170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15893790-15894789 Arabidopsis thaliana
AT3G44170 1.0kb downstream 1.0kb downstream 1468 true Chr3: 15894790-15896257 Arabidopsis thaliana
AT3G44170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15895258-15896257 Arabidopsis thaliana
AT3G44170 2.0kb upstream 2.0kb upstream 2468 true Chr3: 15892790-15895257 Arabidopsis thaliana
AT3G44170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15892790-15894789 Arabidopsis thaliana
AT3G44170 2.0kb downstream 2.0kb downstream 2468 true Chr3: 15894790-15897257 Arabidopsis thaliana
AT3G44170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15895258-15897257 Arabidopsis thaliana
AT3G44170 5.0kb upstream 5.0kb upstream 5468 true Chr3: 15889790-15895257 Arabidopsis thaliana
AT3G44170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15889790-15894789 Arabidopsis thaliana
AT3G44170 5.0kb downstream 5.0kb downstream 5468 true Chr3: 15894790-15900257 Arabidopsis thaliana
AT3G44170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15895258-15900257 Arabidopsis thaliana
AT3G44170 10.0kb upstream 10.0kb upstream 10468 true Chr3: 15884790-15895257 Arabidopsis thaliana
AT3G44170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15884790-15894789 Arabidopsis thaliana
AT3G44170 10.0kb downstream 10.0kb downstream 10468 true Chr3: 15894790-15905257 Arabidopsis thaliana
AT3G44170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15895258-15905257 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510681 5273 Angiosperm View MSA
122366920 5261 Brassicaceae View MSA
123799265 5264 Brassicales-Malvales View MSA
124296806 5266 SBM View MSA
124148856 5268 Malvidae View MSA
123874772 5270 Rosid View MSA
123458698 5271 Pentapetalae View MSA
122494098 5272 Eudicot View MSA
120783766 5274 Embryophyte View MSA
122825740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain