Gene : AT3G30280 A. thaliana TAIR10
Defline:  (1 of 6) 2.3.1.160 - Vinorine synthase Genomic Order:  3170
Name:  ? AT3G30280 Secondary Identifier:  ? PAC:19660685
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G30280 0.5kb upstream 0.5kb upstream 1832 true Chr3: 11913866-11915697 Arabidopsis thaliana
AT3G30280 0.5kb upstream 0.5kb upstream 500 false Chr3: 11913866-11914365 Arabidopsis thaliana
AT3G30280 0.5kb downstream 0.5kb downstream 1832 true Chr3: 11914366-11916197 Arabidopsis thaliana
AT3G30280 0.5kb downstream 0.5kb downstream 500 false Chr3: 11915698-11916197 Arabidopsis thaliana
AT3G30280 1.0kb upstream 1.0kb upstream 2332 true Chr3: 11913366-11915697 Arabidopsis thaliana
AT3G30280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11913366-11914365 Arabidopsis thaliana
AT3G30280 1.0kb downstream 1.0kb downstream 2332 true Chr3: 11914366-11916697 Arabidopsis thaliana
AT3G30280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11915698-11916697 Arabidopsis thaliana
AT3G30280 2.0kb upstream 2.0kb upstream 3332 true Chr3: 11912366-11915697 Arabidopsis thaliana
AT3G30280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11912366-11914365 Arabidopsis thaliana
AT3G30280 2.0kb downstream 2.0kb downstream 3332 true Chr3: 11914366-11917697 Arabidopsis thaliana
AT3G30280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11915698-11917697 Arabidopsis thaliana
AT3G30280 5.0kb upstream 5.0kb upstream 6332 true Chr3: 11909366-11915697 Arabidopsis thaliana
AT3G30280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11909366-11914365 Arabidopsis thaliana
AT3G30280 5.0kb downstream 5.0kb downstream 6332 true Chr3: 11914366-11920697 Arabidopsis thaliana
AT3G30280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11915698-11920697 Arabidopsis thaliana
AT3G30280 10.0kb upstream 10.0kb upstream 11332 true Chr3: 11904366-11915697 Arabidopsis thaliana
AT3G30280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11904366-11914365 Arabidopsis thaliana
AT3G30280 10.0kb downstream 10.0kb downstream 11332 true Chr3: 11914366-11925697 Arabidopsis thaliana
AT3G30280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11915698-11925697 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373393 5261 Brassicaceae View MSA
123800546 5264 Brassicales-Malvales View MSA
124297951 5266 SBM View MSA
124249816 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  

0 Strain