Gene : AT3G29670 A. thaliana TAIR10
Defline:  (1 of 11) PTHR31625//PTHR31625:SF5 - FAMILY NOT NAMED // ACYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  3140
Name:  ? AT3G29670 Secondary Identifier:  ? PAC:19658980
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G29670 0.5kb upstream 0.5kb upstream 1979 true Chr3: 11527372-11529350 Arabidopsis thaliana
AT3G29670 0.5kb upstream 0.5kb upstream 500 false Chr3: 11527372-11527871 Arabidopsis thaliana
AT3G29670 0.5kb downstream 0.5kb downstream 1979 true Chr3: 11527872-11529850 Arabidopsis thaliana
AT3G29670 0.5kb downstream 0.5kb downstream 500 false Chr3: 11529351-11529850 Arabidopsis thaliana
AT3G29670 1.0kb upstream 1.0kb upstream 2479 true Chr3: 11526872-11529350 Arabidopsis thaliana
AT3G29670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11526872-11527871 Arabidopsis thaliana
AT3G29670 1.0kb downstream 1.0kb downstream 2479 true Chr3: 11527872-11530350 Arabidopsis thaliana
AT3G29670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11529351-11530350 Arabidopsis thaliana
AT3G29670 2.0kb upstream 2.0kb upstream 3479 true Chr3: 11525872-11529350 Arabidopsis thaliana
AT3G29670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11525872-11527871 Arabidopsis thaliana
AT3G29670 2.0kb downstream 2.0kb downstream 3479 true Chr3: 11527872-11531350 Arabidopsis thaliana
AT3G29670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11529351-11531350 Arabidopsis thaliana
AT3G29670 5.0kb upstream 5.0kb upstream 6479 true Chr3: 11522872-11529350 Arabidopsis thaliana
AT3G29670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11522872-11527871 Arabidopsis thaliana
AT3G29670 5.0kb downstream 5.0kb downstream 6479 true Chr3: 11527872-11534350 Arabidopsis thaliana
AT3G29670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11529351-11534350 Arabidopsis thaliana
AT3G29670 10.0kb upstream 10.0kb upstream 11479 true Chr3: 11517872-11529350 Arabidopsis thaliana
AT3G29670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11517872-11527871 Arabidopsis thaliana
AT3G29670 10.0kb downstream 10.0kb downstream 11479 true Chr3: 11527872-11539350 Arabidopsis thaliana
AT3G29670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11529351-11539350 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380914 5261 Brassicaceae View MSA
123802967 5264 Brassicales-Malvales View MSA
124300112 5266 SBM View MSA
124151371 5268 Malvidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.606       Low
cufflinks 16.639        
cufflinks 10.353        
cufflinks 18.348        
cufflinks 15.273        
cufflinks 15.508        

0 Strain