Gene : AT3G28960 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  3072
Name:  ? AT3G28960 Secondary Identifier:  ? PAC:19658397
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28960 0.5kb upstream 0.5kb upstream 2023 true Chr3: 10984245-10986267 Arabidopsis thaliana
AT3G28960 0.5kb upstream 0.5kb upstream 500 false Chr3: 10985768-10986267 Arabidopsis thaliana
AT3G28960 0.5kb downstream 0.5kb downstream 2023 true Chr3: 10983745-10985767 Arabidopsis thaliana
AT3G28960 0.5kb downstream 0.5kb downstream 500 false Chr3: 10983745-10984244 Arabidopsis thaliana
AT3G28960 1.0kb upstream 1.0kb upstream 2523 true Chr3: 10984245-10986767 Arabidopsis thaliana
AT3G28960 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10985768-10986767 Arabidopsis thaliana
AT3G28960 1.0kb downstream 1.0kb downstream 2523 true Chr3: 10983245-10985767 Arabidopsis thaliana
AT3G28960 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10983245-10984244 Arabidopsis thaliana
AT3G28960 2.0kb upstream 2.0kb upstream 3523 true Chr3: 10984245-10987767 Arabidopsis thaliana
AT3G28960 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10985768-10987767 Arabidopsis thaliana
AT3G28960 2.0kb downstream 2.0kb downstream 3523 true Chr3: 10982245-10985767 Arabidopsis thaliana
AT3G28960 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10982245-10984244 Arabidopsis thaliana
AT3G28960 5.0kb upstream 5.0kb upstream 6523 true Chr3: 10984245-10990767 Arabidopsis thaliana
AT3G28960 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10985768-10990767 Arabidopsis thaliana
AT3G28960 5.0kb downstream 5.0kb downstream 6523 true Chr3: 10979245-10985767 Arabidopsis thaliana
AT3G28960 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10979245-10984244 Arabidopsis thaliana
AT3G28960 10.0kb upstream 10.0kb upstream 11523 true Chr3: 10984245-10995767 Arabidopsis thaliana
AT3G28960 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10985768-10995767 Arabidopsis thaliana
AT3G28960 10.0kb downstream 10.0kb downstream 11523 true Chr3: 10974245-10985767 Arabidopsis thaliana
AT3G28960 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10974245-10984244 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122373546 5261 Brassicaceae View MSA
123839572 5264 Brassicales-Malvales View MSA
124349563 5266 SBM View MSA
124249048 5268 Malvidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.662        
cufflinks 0.118     Low Low
cufflinks 0.646        
cufflinks 0.418        
cufflinks 0.477        
cufflinks 0.348        

0 Strain