Gene : AT3G28710 A. thaliana TAIR10
Defline:  (1 of 2) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D) Genomic Order:  3040
Name:  ? AT3G28710 Secondary Identifier:  ? PAC:19660191
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28710 0.5kb upstream 0.5kb upstream 3325 true Chr3: 10772903-10776227 Arabidopsis thaliana
AT3G28710 0.5kb upstream 0.5kb upstream 500 false Chr3: 10775728-10776227 Arabidopsis thaliana
AT3G28710 0.5kb downstream 0.5kb downstream 3325 true Chr3: 10772403-10775727 Arabidopsis thaliana
AT3G28710 0.5kb downstream 0.5kb downstream 500 false Chr3: 10772403-10772902 Arabidopsis thaliana
AT3G28710 1.0kb upstream 1.0kb upstream 3825 true Chr3: 10772903-10776727 Arabidopsis thaliana
AT3G28710 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10775728-10776727 Arabidopsis thaliana
AT3G28710 1.0kb downstream 1.0kb downstream 3825 true Chr3: 10771903-10775727 Arabidopsis thaliana
AT3G28710 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10771903-10772902 Arabidopsis thaliana
AT3G28710 2.0kb upstream 2.0kb upstream 4825 true Chr3: 10772903-10777727 Arabidopsis thaliana
AT3G28710 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10775728-10777727 Arabidopsis thaliana
AT3G28710 2.0kb downstream 2.0kb downstream 4825 true Chr3: 10770903-10775727 Arabidopsis thaliana
AT3G28710 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10770903-10772902 Arabidopsis thaliana
AT3G28710 5.0kb upstream 5.0kb upstream 7825 true Chr3: 10772903-10780727 Arabidopsis thaliana
AT3G28710 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10775728-10780727 Arabidopsis thaliana
AT3G28710 5.0kb downstream 5.0kb downstream 7825 true Chr3: 10767903-10775727 Arabidopsis thaliana
AT3G28710 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10767903-10772902 Arabidopsis thaliana
AT3G28710 10.0kb upstream 10.0kb upstream 12825 true Chr3: 10772903-10785727 Arabidopsis thaliana
AT3G28710 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10775728-10785727 Arabidopsis thaliana
AT3G28710 10.0kb downstream 10.0kb downstream 12825 true Chr3: 10762903-10775727 Arabidopsis thaliana
AT3G28710 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10762903-10772902 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370139 5261 Brassicaceae View MSA
123836842 5264 Brassicales-Malvales View MSA
124345235 5266 SBM View MSA
124242151 5268 Malvidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.219     High  
cufflinks 42.92     High  
cufflinks 46.369     High High
cufflinks 41.096     High  
cufflinks 43.608     High  
cufflinks 39.523     High Low

0 Strain