Gene : TDF1 A. thaliana TAIR10
Primary Identifier:  ? AT3G28470 Defline:  (1 of 1) PTHR10641//PTHR10641:SF649 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR
Genomic Order:  3015 Name:  ? AT3G28470
Secondary Identifier:  ? PAC:19661872
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28470 0.5kb upstream 0.5kb upstream 1717 true Chr3: 10674508-10676224 Arabidopsis thaliana
AT3G28470 0.5kb upstream 0.5kb upstream 500 false Chr3: 10675725-10676224 Arabidopsis thaliana
AT3G28470 0.5kb downstream 0.5kb downstream 1717 true Chr3: 10674008-10675724 Arabidopsis thaliana
AT3G28470 0.5kb downstream 0.5kb downstream 500 false Chr3: 10674008-10674507 Arabidopsis thaliana
AT3G28470 1.0kb upstream 1.0kb upstream 2217 true Chr3: 10674508-10676724 Arabidopsis thaliana
AT3G28470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10675725-10676724 Arabidopsis thaliana
AT3G28470 1.0kb downstream 1.0kb downstream 2217 true Chr3: 10673508-10675724 Arabidopsis thaliana
AT3G28470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10673508-10674507 Arabidopsis thaliana
AT3G28470 2.0kb upstream 2.0kb upstream 3217 true Chr3: 10674508-10677724 Arabidopsis thaliana
AT3G28470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10675725-10677724 Arabidopsis thaliana
AT3G28470 2.0kb downstream 2.0kb downstream 3217 true Chr3: 10672508-10675724 Arabidopsis thaliana
AT3G28470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10672508-10674507 Arabidopsis thaliana
AT3G28470 5.0kb upstream 5.0kb upstream 6217 true Chr3: 10674508-10680724 Arabidopsis thaliana
AT3G28470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10675725-10680724 Arabidopsis thaliana
AT3G28470 5.0kb downstream 5.0kb downstream 6217 true Chr3: 10669508-10675724 Arabidopsis thaliana
AT3G28470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10669508-10674507 Arabidopsis thaliana
AT3G28470 10.0kb upstream 10.0kb upstream 11217 true Chr3: 10674508-10685724 Arabidopsis thaliana
AT3G28470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10675725-10685724 Arabidopsis thaliana
AT3G28470 10.0kb downstream 10.0kb downstream 11217 true Chr3: 10664508-10675724 Arabidopsis thaliana
AT3G28470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10664508-10674507 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371751 5261 Brassicaceae View MSA
123838141 5264 Brassicales-Malvales View MSA
124347477 5266 SBM View MSA
124245509 5268 Malvidae View MSA
124071905 5270 Rosid View MSA
123742365 5271 Pentapetalae View MSA
122786353 5272 Eudicot View MSA
122041788 5273 Angiosperm View MSA
121350452 5274 Embryophyte View MSA
123381739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.186     Low  
cufflinks 0.027     Low Low
cufflinks 0.12     Low  
cufflinks 0.045     Low  
cufflinks 0.184     Low  

0 Strain