Gene : AT3G28050 A. thaliana TAIR10
Defline:  (1 of 50) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2969
Name:  ? AT3G28050 Secondary Identifier:  ? PAC:19665052
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28050 0.5kb upstream 0.5kb upstream 3085 true Chr3: 10442314-10445398 Arabidopsis thaliana
AT3G28050 0.5kb upstream 0.5kb upstream 500 false Chr3: 10442314-10442813 Arabidopsis thaliana
AT3G28050 0.5kb downstream 0.5kb downstream 3085 true Chr3: 10442814-10445898 Arabidopsis thaliana
AT3G28050 0.5kb downstream 0.5kb downstream 500 false Chr3: 10445399-10445898 Arabidopsis thaliana
AT3G28050 1.0kb upstream 1.0kb upstream 3585 true Chr3: 10441814-10445398 Arabidopsis thaliana
AT3G28050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10441814-10442813 Arabidopsis thaliana
AT3G28050 1.0kb downstream 1.0kb downstream 3585 true Chr3: 10442814-10446398 Arabidopsis thaliana
AT3G28050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10445399-10446398 Arabidopsis thaliana
AT3G28050 2.0kb upstream 2.0kb upstream 4585 true Chr3: 10440814-10445398 Arabidopsis thaliana
AT3G28050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10440814-10442813 Arabidopsis thaliana
AT3G28050 2.0kb downstream 2.0kb downstream 4585 true Chr3: 10442814-10447398 Arabidopsis thaliana
AT3G28050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10445399-10447398 Arabidopsis thaliana
AT3G28050 5.0kb upstream 5.0kb upstream 7585 true Chr3: 10437814-10445398 Arabidopsis thaliana
AT3G28050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10437814-10442813 Arabidopsis thaliana
AT3G28050 5.0kb downstream 5.0kb downstream 7585 true Chr3: 10442814-10450398 Arabidopsis thaliana
AT3G28050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10445399-10450398 Arabidopsis thaliana
AT3G28050 10.0kb upstream 10.0kb upstream 12585 true Chr3: 10432814-10445398 Arabidopsis thaliana
AT3G28050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10432814-10442813 Arabidopsis thaliana
AT3G28050 10.0kb downstream 10.0kb downstream 12585 true Chr3: 10442814-10455398 Arabidopsis thaliana
AT3G28050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10445399-10455398 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364700 5261 Brassicaceae View MSA
123829523 5264 Brassicales-Malvales View MSA
124350712 5266 SBM View MSA
124251502 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.084       Low
cufflinks 37.121     High High
cufflinks 30.99     High  
cufflinks 34.273     High  
cufflinks 27.415     High Low
cufflinks 33.454     High  

0 Strain