Gene : AT3G59330 A. thaliana TAIR10
Defline:  (1 of 3) PTHR14233//PTHR14233:SF14 - DUF914-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4990
Name:  ? AT3G59330 Secondary Identifier:  ? PAC:19660235
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59330 0.5kb upstream 0.5kb upstream 2039 true Chr3: 21926961-21928999 Arabidopsis thaliana
AT3G59330 0.5kb upstream 0.5kb upstream 500 false Chr3: 21928500-21928999 Arabidopsis thaliana
AT3G59330 0.5kb downstream 0.5kb downstream 2039 true Chr3: 21926461-21928499 Arabidopsis thaliana
AT3G59330 0.5kb downstream 0.5kb downstream 500 false Chr3: 21926461-21926960 Arabidopsis thaliana
AT3G59330 1.0kb upstream 1.0kb upstream 2539 true Chr3: 21926961-21929499 Arabidopsis thaliana
AT3G59330 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21928500-21929499 Arabidopsis thaliana
AT3G59330 1.0kb downstream 1.0kb downstream 2539 true Chr3: 21925961-21928499 Arabidopsis thaliana
AT3G59330 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21925961-21926960 Arabidopsis thaliana
AT3G59330 2.0kb upstream 2.0kb upstream 3539 true Chr3: 21926961-21930499 Arabidopsis thaliana
AT3G59330 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21928500-21930499 Arabidopsis thaliana
AT3G59330 2.0kb downstream 2.0kb downstream 3539 true Chr3: 21924961-21928499 Arabidopsis thaliana
AT3G59330 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21924961-21926960 Arabidopsis thaliana
AT3G59330 5.0kb upstream 5.0kb upstream 6539 true Chr3: 21926961-21933499 Arabidopsis thaliana
AT3G59330 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21928500-21933499 Arabidopsis thaliana
AT3G59330 5.0kb downstream 5.0kb downstream 6539 true Chr3: 21921961-21928499 Arabidopsis thaliana
AT3G59330 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21921961-21926960 Arabidopsis thaliana
AT3G59330 10.0kb upstream 10.0kb upstream 11539 true Chr3: 21926961-21938499 Arabidopsis thaliana
AT3G59330 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21928500-21938499 Arabidopsis thaliana
AT3G59330 10.0kb downstream 10.0kb downstream 11539 true Chr3: 21916961-21928499 Arabidopsis thaliana
AT3G59330 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21916961-21926960 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329836 5261 Brassicaceae Singleton cluster - no MSA
123771121 5264 Brassicales-Malvales Singleton cluster - no MSA
124269653 5266 SBM Singleton cluster - no MSA
124125782 5268 Malvidae Singleton cluster - no MSA
123854736 5270 Rosid Singleton cluster - no MSA
123750436 5271 Pentapetalae View MSA
122794393 5272 Eudicot View MSA
122043877 5273 Angiosperm View MSA
121345871 5274 Embryophyte View MSA
123426042 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.459        
cufflinks 33.306     High High
cufflinks 4.843        
cufflinks 26.411        
cufflinks 5.322        
cufflinks 23.12        

0 Strain