Gene : AT3G58480 A. thaliana TAIR10
Defline:  calmodulin-binding family protein Genomic Order:  4903
Name:  ? AT3G58480 Secondary Identifier:  ? PAC:19664728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58480 0.5kb upstream 0.5kb upstream 3248 true Chr3: 21628606-21631853 Arabidopsis thaliana
AT3G58480 0.5kb upstream 0.5kb upstream 500 false Chr3: 21628606-21629105 Arabidopsis thaliana
AT3G58480 0.5kb downstream 0.5kb downstream 3248 true Chr3: 21629106-21632353 Arabidopsis thaliana
AT3G58480 0.5kb downstream 0.5kb downstream 500 false Chr3: 21631854-21632353 Arabidopsis thaliana
AT3G58480 1.0kb upstream 1.0kb upstream 3748 true Chr3: 21628106-21631853 Arabidopsis thaliana
AT3G58480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21628106-21629105 Arabidopsis thaliana
AT3G58480 1.0kb downstream 1.0kb downstream 3748 true Chr3: 21629106-21632853 Arabidopsis thaliana
AT3G58480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21631854-21632853 Arabidopsis thaliana
AT3G58480 2.0kb upstream 2.0kb upstream 4748 true Chr3: 21627106-21631853 Arabidopsis thaliana
AT3G58480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21627106-21629105 Arabidopsis thaliana
AT3G58480 2.0kb downstream 2.0kb downstream 4748 true Chr3: 21629106-21633853 Arabidopsis thaliana
AT3G58480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21631854-21633853 Arabidopsis thaliana
AT3G58480 5.0kb upstream 5.0kb upstream 7748 true Chr3: 21624106-21631853 Arabidopsis thaliana
AT3G58480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21624106-21629105 Arabidopsis thaliana
AT3G58480 5.0kb downstream 5.0kb downstream 7748 true Chr3: 21629106-21636853 Arabidopsis thaliana
AT3G58480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21631854-21636853 Arabidopsis thaliana
AT3G58480 10.0kb upstream 10.0kb upstream 12748 true Chr3: 21619106-21631853 Arabidopsis thaliana
AT3G58480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21619106-21629105 Arabidopsis thaliana
AT3G58480 10.0kb downstream 10.0kb downstream 12748 true Chr3: 21629106-21641853 Arabidopsis thaliana
AT3G58480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21631854-21641853 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366492 5261 Brassicaceae View MSA
123835902 5264 Brassicales-Malvales View MSA
124337338 5266 SBM View MSA
124237165 5268 Malvidae View MSA
124064721 5270 Rosid View MSA
123737438 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.09     Low High
cufflinks 0.011     Low  
cufflinks 0.029     Low  
cufflinks 0.006     Low Low
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain