Gene : AT3G58360 A. thaliana TAIR10
Defline:  (1 of 64) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  4891
Name:  ? AT3G58360 Secondary Identifier:  ? PAC:19659542
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58360 0.5kb upstream 0.5kb upstream 1862 true Chr3: 21593505-21595366 Arabidopsis thaliana
AT3G58360 0.5kb upstream 0.5kb upstream 500 false Chr3: 21594867-21595366 Arabidopsis thaliana
AT3G58360 0.5kb downstream 0.5kb downstream 1862 true Chr3: 21593005-21594866 Arabidopsis thaliana
AT3G58360 0.5kb downstream 0.5kb downstream 500 false Chr3: 21593005-21593504 Arabidopsis thaliana
AT3G58360 1.0kb upstream 1.0kb upstream 2362 true Chr3: 21593505-21595866 Arabidopsis thaliana
AT3G58360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21594867-21595866 Arabidopsis thaliana
AT3G58360 1.0kb downstream 1.0kb downstream 2362 true Chr3: 21592505-21594866 Arabidopsis thaliana
AT3G58360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21592505-21593504 Arabidopsis thaliana
AT3G58360 2.0kb upstream 2.0kb upstream 3362 true Chr3: 21593505-21596866 Arabidopsis thaliana
AT3G58360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21594867-21596866 Arabidopsis thaliana
AT3G58360 2.0kb downstream 2.0kb downstream 3362 true Chr3: 21591505-21594866 Arabidopsis thaliana
AT3G58360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21591505-21593504 Arabidopsis thaliana
AT3G58360 5.0kb upstream 5.0kb upstream 6362 true Chr3: 21593505-21599866 Arabidopsis thaliana
AT3G58360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21594867-21599866 Arabidopsis thaliana
AT3G58360 5.0kb downstream 5.0kb downstream 6362 true Chr3: 21588505-21594866 Arabidopsis thaliana
AT3G58360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21588505-21593504 Arabidopsis thaliana
AT3G58360 10.0kb upstream 10.0kb upstream 11362 true Chr3: 21593505-21604866 Arabidopsis thaliana
AT3G58360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21594867-21604866 Arabidopsis thaliana
AT3G58360 10.0kb downstream 10.0kb downstream 11362 true Chr3: 21583505-21594866 Arabidopsis thaliana
AT3G58360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21583505-21593504 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain