Gene : SUE4 A. thaliana TAIR10
Primary Identifier:  ? AT3G55880 Defline:  (1 of 2) PTHR34953//PTHR34953:SF1 - FAMILY NOT NAMED // ALPHA/BETA HYDROLASE RELATED PROTEIN
Genomic Order:  4640 Name:  ? AT3G55880
Secondary Identifier:  ? PAC:19661613
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55880 0.5kb upstream 0.5kb upstream 2843 true Chr3: 20736071-20738913 Arabidopsis thaliana
AT3G55880 0.5kb upstream 0.5kb upstream 500 false Chr3: 20736071-20736570 Arabidopsis thaliana
AT3G55880 0.5kb downstream 0.5kb downstream 2843 true Chr3: 20736571-20739413 Arabidopsis thaliana
AT3G55880 0.5kb downstream 0.5kb downstream 500 false Chr3: 20738914-20739413 Arabidopsis thaliana
AT3G55880 1.0kb upstream 1.0kb upstream 3343 true Chr3: 20735571-20738913 Arabidopsis thaliana
AT3G55880 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20735571-20736570 Arabidopsis thaliana
AT3G55880 1.0kb downstream 1.0kb downstream 3343 true Chr3: 20736571-20739913 Arabidopsis thaliana
AT3G55880 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20738914-20739913 Arabidopsis thaliana
AT3G55880 2.0kb upstream 2.0kb upstream 4343 true Chr3: 20734571-20738913 Arabidopsis thaliana
AT3G55880 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20734571-20736570 Arabidopsis thaliana
AT3G55880 2.0kb downstream 2.0kb downstream 4343 true Chr3: 20736571-20740913 Arabidopsis thaliana
AT3G55880 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20738914-20740913 Arabidopsis thaliana
AT3G55880 5.0kb upstream 5.0kb upstream 7343 true Chr3: 20731571-20738913 Arabidopsis thaliana
AT3G55880 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20731571-20736570 Arabidopsis thaliana
AT3G55880 5.0kb downstream 5.0kb downstream 7343 true Chr3: 20736571-20743913 Arabidopsis thaliana
AT3G55880 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20738914-20743913 Arabidopsis thaliana
AT3G55880 10.0kb upstream 10.0kb upstream 12343 true Chr3: 20726571-20738913 Arabidopsis thaliana
AT3G55880 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20726571-20736570 Arabidopsis thaliana
AT3G55880 10.0kb downstream 10.0kb downstream 12343 true Chr3: 20736571-20748913 Arabidopsis thaliana
AT3G55880 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20738914-20748913 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379664 5261 Brassicaceae View MSA
123836692 5264 Brassicales-Malvales View MSA
124337185 5266 SBM View MSA
124243541 5268 Malvidae View MSA
124066621 5270 Rosid View MSA
123741764 5271 Pentapetalae View MSA
122789976 5272 Eudicot View MSA
122043684 5273 Angiosperm View MSA
121346318 5274 Embryophyte View MSA
123380366 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.262        
cufflinks 9.202       High
cufflinks 5.473       Low
cufflinks 8.822        
cufflinks 7.879        
cufflinks 6.012        

0 Strain