Gene : AT3G55710 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11926:SF204 - UDP-GLYCOSYLTRANSFERASE 76C1-RELATED Genomic Order:  4623
Name:  ? AT3G55710 Secondary Identifier:  ? PAC:19664711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55710 0.5kb upstream 0.5kb upstream 2600 true Chr3: 20673347-20675946 Arabidopsis thaliana
AT3G55710 0.5kb upstream 0.5kb upstream 500 false Chr3: 20673347-20673846 Arabidopsis thaliana
AT3G55710 0.5kb downstream 0.5kb downstream 2600 true Chr3: 20673847-20676446 Arabidopsis thaliana
AT3G55710 0.5kb downstream 0.5kb downstream 500 false Chr3: 20675947-20676446 Arabidopsis thaliana
AT3G55710 1.0kb upstream 1.0kb upstream 3100 true Chr3: 20672847-20675946 Arabidopsis thaliana
AT3G55710 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20672847-20673846 Arabidopsis thaliana
AT3G55710 1.0kb downstream 1.0kb downstream 3100 true Chr3: 20673847-20676946 Arabidopsis thaliana
AT3G55710 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20675947-20676946 Arabidopsis thaliana
AT3G55710 2.0kb upstream 2.0kb upstream 4100 true Chr3: 20671847-20675946 Arabidopsis thaliana
AT3G55710 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20671847-20673846 Arabidopsis thaliana
AT3G55710 2.0kb downstream 2.0kb downstream 4100 true Chr3: 20673847-20677946 Arabidopsis thaliana
AT3G55710 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20675947-20677946 Arabidopsis thaliana
AT3G55710 5.0kb upstream 5.0kb upstream 7100 true Chr3: 20668847-20675946 Arabidopsis thaliana
AT3G55710 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20668847-20673846 Arabidopsis thaliana
AT3G55710 5.0kb downstream 5.0kb downstream 7100 true Chr3: 20673847-20680946 Arabidopsis thaliana
AT3G55710 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20675947-20680946 Arabidopsis thaliana
AT3G55710 10.0kb upstream 10.0kb upstream 12100 true Chr3: 20663847-20675946 Arabidopsis thaliana
AT3G55710 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20663847-20673846 Arabidopsis thaliana
AT3G55710 10.0kb downstream 10.0kb downstream 12100 true Chr3: 20673847-20685946 Arabidopsis thaliana
AT3G55710 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20675947-20685946 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376980 5261 Brassicaceae View MSA
123830444 5264 Brassicales-Malvales View MSA
124321674 5266 SBM View MSA
124253566 5268 Malvidae View MSA
124072411 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.161       High
cufflinks 0.022     Low  
cufflinks 2.654        
cufflinks 0.015     Low Low
cufflinks 1.785        
cufflinks 0.038     Low  

0 Strain