Gene : AT3G54570 A. thaliana TAIR10
Defline:  (1 of 8) 2.7.11.17 - Calcium/calmodulin-dependent protein kinase / Microtubule-associated protein 2 kinase Genomic Order:  4495
Name:  ? AT3G54570 Secondary Identifier:  ? PAC:19662366
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54570 0.5kb upstream 0.5kb upstream 1754 true Chr3: 20197949-20199702 Arabidopsis thaliana
AT3G54570 0.5kb upstream 0.5kb upstream 500 false Chr3: 20199203-20199702 Arabidopsis thaliana
AT3G54570 0.5kb downstream 0.5kb downstream 1754 true Chr3: 20197449-20199202 Arabidopsis thaliana
AT3G54570 0.5kb downstream 0.5kb downstream 500 false Chr3: 20197449-20197948 Arabidopsis thaliana
AT3G54570 1.0kb upstream 1.0kb upstream 2254 true Chr3: 20197949-20200202 Arabidopsis thaliana
AT3G54570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20199203-20200202 Arabidopsis thaliana
AT3G54570 1.0kb downstream 1.0kb downstream 2254 true Chr3: 20196949-20199202 Arabidopsis thaliana
AT3G54570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20196949-20197948 Arabidopsis thaliana
AT3G54570 2.0kb upstream 2.0kb upstream 3254 true Chr3: 20197949-20201202 Arabidopsis thaliana
AT3G54570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20199203-20201202 Arabidopsis thaliana
AT3G54570 2.0kb downstream 2.0kb downstream 3254 true Chr3: 20195949-20199202 Arabidopsis thaliana
AT3G54570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20195949-20197948 Arabidopsis thaliana
AT3G54570 5.0kb upstream 5.0kb upstream 6254 true Chr3: 20197949-20204202 Arabidopsis thaliana
AT3G54570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20199203-20204202 Arabidopsis thaliana
AT3G54570 5.0kb downstream 5.0kb downstream 6254 true Chr3: 20192949-20199202 Arabidopsis thaliana
AT3G54570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20192949-20197948 Arabidopsis thaliana
AT3G54570 10.0kb upstream 10.0kb upstream 11254 true Chr3: 20197949-20209202 Arabidopsis thaliana
AT3G54570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20199203-20209202 Arabidopsis thaliana
AT3G54570 10.0kb downstream 10.0kb downstream 11254 true Chr3: 20187949-20199202 Arabidopsis thaliana
AT3G54570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20187949-20197948 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343529 5261 Brassicaceae View MSA
123783703 5264 Brassicales-Malvales View MSA
124281921 5266 SBM View MSA
124136595 5268 Malvidae View MSA
123864432 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain