Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G54700 0.5kb upstream | 0.5kb | upstream | 2146 | true | Chr3: 20248425-20250570 | Arabidopsis thaliana |
AT3G54700 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 20250071-20250570 | Arabidopsis thaliana |
AT3G54700 0.5kb downstream | 0.5kb | downstream | 2146 | true | Chr3: 20247925-20250070 | Arabidopsis thaliana |
AT3G54700 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 20247925-20248424 | Arabidopsis thaliana |
AT3G54700 1.0kb upstream | 1.0kb | upstream | 2646 | true | Chr3: 20248425-20251070 | Arabidopsis thaliana |
AT3G54700 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 20250071-20251070 | Arabidopsis thaliana |
AT3G54700 1.0kb downstream | 1.0kb | downstream | 2646 | true | Chr3: 20247425-20250070 | Arabidopsis thaliana |
AT3G54700 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 20247425-20248424 | Arabidopsis thaliana |
AT3G54700 2.0kb upstream | 2.0kb | upstream | 3646 | true | Chr3: 20248425-20252070 | Arabidopsis thaliana |
AT3G54700 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 20250071-20252070 | Arabidopsis thaliana |
AT3G54700 2.0kb downstream | 2.0kb | downstream | 3646 | true | Chr3: 20246425-20250070 | Arabidopsis thaliana |
AT3G54700 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 20246425-20248424 | Arabidopsis thaliana |
AT3G54700 5.0kb upstream | 5.0kb | upstream | 6646 | true | Chr3: 20248425-20255070 | Arabidopsis thaliana |
AT3G54700 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 20250071-20255070 | Arabidopsis thaliana |
AT3G54700 5.0kb downstream | 5.0kb | downstream | 6646 | true | Chr3: 20243425-20250070 | Arabidopsis thaliana |
AT3G54700 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 20243425-20248424 | Arabidopsis thaliana |
AT3G54700 10.0kb upstream | 10.0kb | upstream | 11646 | true | Chr3: 20248425-20260070 | Arabidopsis thaliana |
AT3G54700 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 20250071-20260070 | Arabidopsis thaliana |
AT3G54700 10.0kb downstream | 10.0kb | downstream | 11646 | true | Chr3: 20238425-20250070 | Arabidopsis thaliana |
AT3G54700 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 20238425-20248424 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122379144 | 5261 | Brassicaceae | View MSA |
123802110 | 5264 | Brassicales-Malvales | View MSA |
124299329 | 5266 | SBM | View MSA |
124253137 | 5268 | Malvidae | View MSA |
124069579 | 5270 | Rosid | View MSA |
123750757 | 5271 | Pentapetalae | View MSA |
122797214 | 5272 | Eudicot | View MSA |
122045312 | 5273 | Angiosperm | View MSA |
121348560 | 5274 | Embryophyte | View MSA |
123428081 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.009 | Low | Low | ||
cufflinks | 0.129 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.019 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.081 | Low |