Gene : STV1 A. thaliana TAIR10
Primary Identifier:  ? AT3G53020 Defline:  (1 of 3) K02896 - large subunit ribosomal protein L24e (RP-L24e, RPL24)
Genomic Order:  4331 Name:  ? AT3G53020
Secondary Identifier:  ? PAC:19660324
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53020 0.5kb upstream 0.5kb upstream 2009 true Chr3: 19660517-19662525 Arabidopsis thaliana
AT3G53020 0.5kb upstream 0.5kb upstream 500 false Chr3: 19662026-19662525 Arabidopsis thaliana
AT3G53020 0.5kb downstream 0.5kb downstream 2009 true Chr3: 19660017-19662025 Arabidopsis thaliana
AT3G53020 0.5kb downstream 0.5kb downstream 500 false Chr3: 19660017-19660516 Arabidopsis thaliana
AT3G53020 1.0kb upstream 1.0kb upstream 2509 true Chr3: 19660517-19663025 Arabidopsis thaliana
AT3G53020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19662026-19663025 Arabidopsis thaliana
AT3G53020 1.0kb downstream 1.0kb downstream 2509 true Chr3: 19659517-19662025 Arabidopsis thaliana
AT3G53020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19659517-19660516 Arabidopsis thaliana
AT3G53020 2.0kb upstream 2.0kb upstream 3509 true Chr3: 19660517-19664025 Arabidopsis thaliana
AT3G53020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19662026-19664025 Arabidopsis thaliana
AT3G53020 2.0kb downstream 2.0kb downstream 3509 true Chr3: 19658517-19662025 Arabidopsis thaliana
AT3G53020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19658517-19660516 Arabidopsis thaliana
AT3G53020 5.0kb upstream 5.0kb upstream 6509 true Chr3: 19660517-19667025 Arabidopsis thaliana
AT3G53020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19662026-19667025 Arabidopsis thaliana
AT3G53020 5.0kb downstream 5.0kb downstream 6509 true Chr3: 19655517-19662025 Arabidopsis thaliana
AT3G53020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19655517-19660516 Arabidopsis thaliana
AT3G53020 10.0kb upstream 10.0kb upstream 11509 true Chr3: 19660517-19672025 Arabidopsis thaliana
AT3G53020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19662026-19672025 Arabidopsis thaliana
AT3G53020 10.0kb downstream 10.0kb downstream 11509 true Chr3: 19650517-19662025 Arabidopsis thaliana
AT3G53020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19650517-19660516 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379147 5261 Brassicaceae View MSA
123841539 5264 Brassicales-Malvales View MSA
124340965 5266 SBM View MSA
124249000 5268 Malvidae View MSA
124073866 5270 Rosid View MSA
123744238 5271 Pentapetalae View MSA
122794538 5272 Eudicot View MSA
122046376 5273 Angiosperm View MSA
121343913 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.644     High  
cufflinks 182.036     High  
cufflinks 129.281     High  
cufflinks 201.306     High  
cufflinks 119.841     High Low
cufflinks 231.468     High High

0 Strain