Gene : NF-YB10 A. thaliana TAIR10
Primary Identifier:  ? AT3G53340 Defline:  (1 of 3) PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED
Genomic Order:  4369 Name:  ? AT3G53340
Secondary Identifier:  ? PAC:19662379
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53340 0.5kb upstream 0.5kb upstream 2375 true Chr3: 19774331-19776705 Arabidopsis thaliana
AT3G53340 0.5kb upstream 0.5kb upstream 500 false Chr3: 19776206-19776705 Arabidopsis thaliana
AT3G53340 0.5kb downstream 0.5kb downstream 2375 true Chr3: 19773831-19776205 Arabidopsis thaliana
AT3G53340 0.5kb downstream 0.5kb downstream 500 false Chr3: 19773831-19774330 Arabidopsis thaliana
AT3G53340 1.0kb upstream 1.0kb upstream 2875 true Chr3: 19774331-19777205 Arabidopsis thaliana
AT3G53340 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19776206-19777205 Arabidopsis thaliana
AT3G53340 1.0kb downstream 1.0kb downstream 2875 true Chr3: 19773331-19776205 Arabidopsis thaliana
AT3G53340 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19773331-19774330 Arabidopsis thaliana
AT3G53340 2.0kb upstream 2.0kb upstream 3875 true Chr3: 19774331-19778205 Arabidopsis thaliana
AT3G53340 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19776206-19778205 Arabidopsis thaliana
AT3G53340 2.0kb downstream 2.0kb downstream 3875 true Chr3: 19772331-19776205 Arabidopsis thaliana
AT3G53340 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19772331-19774330 Arabidopsis thaliana
AT3G53340 5.0kb upstream 5.0kb upstream 6875 true Chr3: 19774331-19781205 Arabidopsis thaliana
AT3G53340 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19776206-19781205 Arabidopsis thaliana
AT3G53340 5.0kb downstream 5.0kb downstream 6875 true Chr3: 19769331-19776205 Arabidopsis thaliana
AT3G53340 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19769331-19774330 Arabidopsis thaliana
AT3G53340 10.0kb upstream 10.0kb upstream 11875 true Chr3: 19774331-19786205 Arabidopsis thaliana
AT3G53340 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19776206-19786205 Arabidopsis thaliana
AT3G53340 10.0kb downstream 10.0kb downstream 11875 true Chr3: 19764331-19776205 Arabidopsis thaliana
AT3G53340 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19764331-19774330 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374244 5261 Brassicaceae View MSA
123837518 5264 Brassicales-Malvales View MSA
124348681 5266 SBM View MSA
124247795 5268 Malvidae View MSA
124066236 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.645        
cufflinks 15.422        
cufflinks 7.871        
cufflinks 14.658        
cufflinks 6.559       Low
cufflinks 16.942       High

0 Strain