Gene : IQD3 A. thaliana TAIR10
Primary Identifier:  ? AT3G52290 Defline:  (1 of 2) PTHR32295//PTHR32295:SF32 - FAMILY NOT NAMED // PROTEIN IQ-DOMAIN 3-RELATED
Genomic Order:  4255 Name:  ? AT3G52290
Secondary Identifier:  ? PAC:19662675
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52290 0.5kb upstream 0.5kb upstream 3085 true Chr3: 19393319-19396403 Arabidopsis thaliana
AT3G52290 0.5kb upstream 0.5kb upstream 500 false Chr3: 19393319-19393818 Arabidopsis thaliana
AT3G52290 0.5kb downstream 0.5kb downstream 3085 true Chr3: 19393819-19396903 Arabidopsis thaliana
AT3G52290 0.5kb downstream 0.5kb downstream 500 false Chr3: 19396404-19396903 Arabidopsis thaliana
AT3G52290 1.0kb upstream 1.0kb upstream 3585 true Chr3: 19392819-19396403 Arabidopsis thaliana
AT3G52290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19392819-19393818 Arabidopsis thaliana
AT3G52290 1.0kb downstream 1.0kb downstream 3585 true Chr3: 19393819-19397403 Arabidopsis thaliana
AT3G52290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19396404-19397403 Arabidopsis thaliana
AT3G52290 2.0kb upstream 2.0kb upstream 4585 true Chr3: 19391819-19396403 Arabidopsis thaliana
AT3G52290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19391819-19393818 Arabidopsis thaliana
AT3G52290 2.0kb downstream 2.0kb downstream 4585 true Chr3: 19393819-19398403 Arabidopsis thaliana
AT3G52290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19396404-19398403 Arabidopsis thaliana
AT3G52290 5.0kb upstream 5.0kb upstream 7585 true Chr3: 19388819-19396403 Arabidopsis thaliana
AT3G52290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19388819-19393818 Arabidopsis thaliana
AT3G52290 5.0kb downstream 5.0kb downstream 7585 true Chr3: 19393819-19401403 Arabidopsis thaliana
AT3G52290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19396404-19401403 Arabidopsis thaliana
AT3G52290 10.0kb upstream 10.0kb upstream 12585 true Chr3: 19383819-19396403 Arabidopsis thaliana
AT3G52290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19383819-19393818 Arabidopsis thaliana
AT3G52290 10.0kb downstream 10.0kb downstream 12585 true Chr3: 19393819-19406403 Arabidopsis thaliana
AT3G52290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19396404-19406403 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367836 5261 Brassicaceae View MSA
123828229 5264 Brassicales-Malvales View MSA
124336861 5266 SBM View MSA
124253860 5268 Malvidae View MSA
124069288 5270 Rosid View MSA
123743495 5271 Pentapetalae View MSA
122791469 5272 Eudicot View MSA
122044352 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11       High
cufflinks 3.842        
cufflinks 6.257        
cufflinks 3.879        
cufflinks 4.236        
cufflinks 4.953        

0 Strain