Gene : AT3G52390 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10060//PTHR10060:SF15 - TATD FAMILY DEOXYRIBONUCLEASE // DEOXYRIBONUCLEASE TATDN1-RELATED Genomic Order:  4266
Name:  ? AT3G52390 Secondary Identifier:  ? PAC:19664804
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52390 0.5kb upstream 0.5kb upstream 2727 true Chr3: 19422988-19425714 Arabidopsis thaliana
AT3G52390 0.5kb upstream 0.5kb upstream 500 false Chr3: 19425215-19425714 Arabidopsis thaliana
AT3G52390 0.5kb downstream 0.5kb downstream 2727 true Chr3: 19422488-19425214 Arabidopsis thaliana
AT3G52390 0.5kb downstream 0.5kb downstream 500 false Chr3: 19422488-19422987 Arabidopsis thaliana
AT3G52390 1.0kb upstream 1.0kb upstream 3227 true Chr3: 19422988-19426214 Arabidopsis thaliana
AT3G52390 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19425215-19426214 Arabidopsis thaliana
AT3G52390 1.0kb downstream 1.0kb downstream 3227 true Chr3: 19421988-19425214 Arabidopsis thaliana
AT3G52390 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19421988-19422987 Arabidopsis thaliana
AT3G52390 2.0kb upstream 2.0kb upstream 4227 true Chr3: 19422988-19427214 Arabidopsis thaliana
AT3G52390 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19425215-19427214 Arabidopsis thaliana
AT3G52390 2.0kb downstream 2.0kb downstream 4227 true Chr3: 19420988-19425214 Arabidopsis thaliana
AT3G52390 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19420988-19422987 Arabidopsis thaliana
AT3G52390 5.0kb upstream 5.0kb upstream 7227 true Chr3: 19422988-19430214 Arabidopsis thaliana
AT3G52390 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19425215-19430214 Arabidopsis thaliana
AT3G52390 5.0kb downstream 5.0kb downstream 7227 true Chr3: 19417988-19425214 Arabidopsis thaliana
AT3G52390 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19417988-19422987 Arabidopsis thaliana
AT3G52390 10.0kb upstream 10.0kb upstream 12227 true Chr3: 19422988-19435214 Arabidopsis thaliana
AT3G52390 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19425215-19435214 Arabidopsis thaliana
AT3G52390 10.0kb downstream 10.0kb downstream 12227 true Chr3: 19412988-19425214 Arabidopsis thaliana
AT3G52390 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19412988-19422987 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364837 5261 Brassicaceae View MSA
123834743 5264 Brassicales-Malvales View MSA
124342043 5266 SBM View MSA
124238053 5268 Malvidae View MSA
124066982 5270 Rosid View MSA
123737057 5271 Pentapetalae View MSA
122786612 5272 Eudicot View MSA
122047373 5273 Angiosperm View MSA
121345564 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.689       Low
cufflinks 2.335        
cufflinks 1.852        
cufflinks 2.338        
cufflinks 1.732        
cufflinks 2.358        

0 Strain